EnhancerDB
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  3. rs1002706[chr1:25051153]
Enhancers that have rs1002706[chr1:25051153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 25051079 25051208 vista792
VISTA
Transcript factors that have rs1002706[chr1:25051153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25049960 25051595 ZNF274 GTRD no Blood (GM12878) 107802464
chr1 25051140 25051158 ESR2 JASPAR yes 27523405
chr1 25051140 25051158 ESR2 JASPAR yes 118251658
chr1 25051143 25051154 USF1 JASPAR yes 27523408
chr1 25051143 25051154 USF1 JASPAR yes 118251661
chr1 25051144 25051154 TFE3 JASPAR yes 27523409
chr1 25051144 25051154 TFEB JASPAR yes 27523410
chr1 25051144 25051154 TFEC JASPAR yes 27523411
chr1 25051144 25051154 TFE3 JASPAR yes 118251662
chr1 25051144 25051154 TFEB JASPAR yes 118251663
chr1 25051144 25051154 TFEC JASPAR yes 118251664
chr1 25051144 25051155 USF1 JASPAR yes 27523412
chr1 25051144 25051155 USF2 JASPAR yes 27523413
chr1 25051144 25051155 USF1 JASPAR yes 118251665
chr1 25051144 25051155 USF2 JASPAR yes 118251666
chr1 25051145 25051155 MAX JASPAR yes 27523414
chr1 25051145 25051155 MAX JASPAR yes 118251667
chr1 25051151 25051155 ESR1 TRANSFAC yes 27523415
chr1 25051151 25051155 ESR1 TRANSFAC yes 118251668
chr1 25051153 25051170 RXRA JASPAR yes 27523416
chr1 25051153 25051170 RXRA JASPAR yes 118251669
Genes associated with rs1002706[chr1:25051153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More