EnhancerDB
  1. Home
  2. Enhancers
  3. vista818[chr1:25353190-25353411]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista818[chr1:25353190-25353411]
Back to top
Tissue distribution of vista818
Back to top
Transcription factor that possibly regulate vista818[chr1:25353190-25353411]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25353189 25353195 GATA3 JASPAR yes 27555243
chr1 25353189 25353195 GATA3 JASPAR yes 118252766
chr1 25353194 25353209 RUNX2 JASPAR yes 27555244
chr1 25353194 25353209 RUNX2 JASPAR yes 118252767
chr1 25353196 25353207 TFAP2C JASPAR yes 27555245
chr1 25353196 25353207 TFAP2C JASPAR yes 118252768
chr1 25353203 25353213 ID4 JASPAR yes 27555246
chr1 25353203 25353213 TCF3 JASPAR yes 27555247
chr1 25353203 25353213 TCF4 JASPAR yes 27555248
chr1 25353203 25353213 ID4 JASPAR yes 118252769
chr1 25353203 25353213 TCF3 JASPAR yes 118252770
chr1 25353203 25353213 TCF4 JASPAR yes 118252771
chr1 25353204 25353213 SNAI2 JASPAR yes 27555249
chr1 25353204 25353213 SNAI2 JASPAR yes 118252772
chr1 25353205 25353210 USF2 TRANSFAC yes 27555250
chr1 25353205 25353210 USF2 TRANSFAC yes 118252773
chr1 25353213 25353228 MEF2C JASPAR yes 27555251
chr1 25353213 25353228 MEF2C JASPAR yes 118252774
chr1 25353214 25353229 MEF2A JASPAR yes 27555252
chr1 25353214 25353229 MEF2A JASPAR yes 118252775
chr1 25353215 25353227 MEF2A JASPAR yes 27555253
chr1 25353215 25353227 MEF2B JASPAR yes 27555254
chr1 25353215 25353227 MEF2D JASPAR yes 27555255
chr1 25353215 25353227 MEF2A JASPAR yes 118252776
chr1 25353215 25353227 MEF2B JASPAR yes 118252777
chr1 25353215 25353227 MEF2D JASPAR yes 118252778
chr1 25353216 25353226 MEF2A JASPAR yes 27555256
chr1 25353216 25353226 MEF2A JASPAR yes 118252779
chr1 25353216 25353230 IRF7 JASPAR yes 27555257
chr1 25353216 25353230 IRF7 JASPAR yes 118252780
chr1 25353243 25353263 RREB1 JASPAR yes 27555258
chr1 25353243 25353263 RREB1 JASPAR yes 118252781
chr1 25353251 25353271 RREB1 JASPAR yes 27555259
chr1 25353251 25353271 RREB1 JASPAR yes 118252782
chr1 25353280 25353284 H4TF2 TRANSFAC yes 27555260
chr1 25353280 25353284 H4TF2 TRANSFAC yes 118252783
chr1 25353287 25353301 SPI1 JASPAR yes 27555261
chr1 25353287 25353301 SPI1 JASPAR yes 118252784
chr1 25353311 25353326 STAT1 JASPAR yes 27555262
chr1 25353311 25353326 STAT1 JASPAR yes 118252785
chr1 25353311 25353330 RFX2 JASPAR yes 27555263
chr1 25353311 25353330 RFX2 JASPAR yes 118252786
chr1 25353318 25353328 RELA JASPAR yes 27555264
chr1 25353318 25353328 RELA JASPAR yes 118252787
chr1 25353318 25353329 NFKB1 JASPAR yes 27555265
chr1 25353318 25353329 NFKB1 JASPAR yes 118252788
chr1 25353319 25353329 RELA JASPAR yes 27555266
chr1 25353319 25353329 REL JASPAR yes 27555267
chr1 25353319 25353329 RELA JASPAR yes 118252789
chr1 25353319 25353329 REL JASPAR yes 118252790
chr1 25353332 25353337 ETS2 TRANSFAC yes 27555268
chr1 25353332 25353337 ETS2 TRANSFAC yes 118252791
chr1 25353341 25353346 ETS2 TRANSFAC yes 27555269
chr1 25353341 25353346 ETS2 TRANSFAC yes 118252792
chr1 25353357 25353368 E2F4 JASPAR yes 27555270
chr1 25353357 25353368 E2F4 JASPAR yes 118252793
chr1 25353361 25353366 ETS2 TRANSFAC yes 27555271
chr1 25353361 25353366 ETS2 TRANSFAC yes 118252794
chr1 25353387 25353408 REST JASPAR yes 27555272
chr1 25353387 25353408 REST JASPAR yes 118252795
chr1 25353388 25353407 REST JASPAR yes 27555273
chr1 25353388 25353407 REST JASPAR yes 118252796
chr1 25353391 25353395 NFE TRANSFAC yes 27555274
chr1 25353391 25353395 NFE TRANSFAC yes 118252797
chr1 25353399 25353403 H4TF2 TRANSFAC yes 27555275
chr1 25353399 25353403 H4TF2 TRANSFAC yes 118252798
SNP sites on vista818[chr1:25353190-25353411]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25353192 rs311428 A G
GATA3
170569
chr1 25353235 rs311429 T A no 170570
chr1 25353256 rs12132903 T C
RREB1
170571
Genes possibly regulated by vista818[chr1:25353190-25353411]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 38422
Expression level of Genes
Back to top
miRNAs possibly regulated by vista818[chr1:25353190-25353411]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results