EnhancerDB
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  3. rs311428[chr1:25353192]
Enhancers that have rs311428[chr1:25353192]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
chr1 25353190 25353411 vista818
VISTA
Transcript factors that have rs311428[chr1:25353192]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25353189 25353195 GATA3 JASPAR yes 27555243
chr1 25353189 25353195 GATA3 JASPAR yes 118252766
Genes associated with rs311428[chr1:25353192], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More