EnhancerDB
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  3. vista819[chr1:25353540-25353869]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista819[chr1:25353540-25353869]
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Tissue distribution of vista819
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Transcription factor that possibly regulate vista819[chr1:25353540-25353869]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25353553 25353572 REST JASPAR yes 27555284
chr1 25353553 25353572 REST JASPAR yes 118252799
chr1 25353554 25353560 ETS1 JASPAR yes 27555285
chr1 25353554 25353560 SPI1 JASPAR yes 27555286
chr1 25353554 25353560 ETS1 JASPAR yes 118252800
chr1 25353554 25353560 SPI1 JASPAR yes 118252801
chr1 25353591 25353604 NFKB1 JASPAR yes 27555287
chr1 25353591 25353604 NFKB2 JASPAR yes 27555288
chr1 25353591 25353604 NFKB1 JASPAR yes 118252802
chr1 25353591 25353604 NFKB2 JASPAR yes 118252803
chr1 25353592 25353602 NFKB1 JASPAR yes 27555289
chr1 25353592 25353602 RELA JASPAR yes 27555290
chr1 25353592 25353602 NFKB1 JASPAR yes 118252804
chr1 25353592 25353602 RELA JASPAR yes 118252805
chr1 25353592 25353603 NFKB1 JASPAR yes 27555291
chr1 25353592 25353603 NFKB1 JASPAR yes 118252806
chr1 25353592 25353609 RARA JASPAR yes 27555292
chr1 25353592 25353609 RARA JASPAR yes 118252807
chr1 25353593 25353603 RELA JASPAR yes 27555293
chr1 25353593 25353603 RELA JASPAR yes 118252808
chr1 25353629 25353639 SP1 TRANSFAC yes 27555294
chr1 25353629 25353639 SP1 TRANSFAC yes 118252809
chr1 25353630 25353640 SP1 JASPAR yes 27555295
chr1 25353630 25353640 SP1 JASPAR yes 118252810
chr1 25353631 25353637 SP1 TRANSFAC yes 27555296
chr1 25353631 25353637 SP1 TRANSFAC yes 118252811
chr1 25353631 25353641 SP1 JASPAR yes 27555297
chr1 25353631 25353641 SP1 JASPAR yes 118252812
chr1 25353635 25353641 MZF1 JASPAR yes 27555298
chr1 25353635 25353641 MZF1 JASPAR yes 118252813
chr1 25353657 25353661 NFE TRANSFAC yes 27555299
chr1 25353657 25353661 NFE TRANSFAC yes 118252814
chr1 25353659 25353672 POU2F2 JASPAR yes 27555300
chr1 25353659 25353672 POU2F2 JASPAR yes 118252815
chr1 25353659 25353673 POU1F1 JASPAR yes 27555301
chr1 25353659 25353673 POU1F1 JASPAR yes 118252816
chr1 25353660 25353672 POU3F1 JASPAR yes 27555302
chr1 25353660 25353672 POU3F2 JASPAR yes 27555303
chr1 25353660 25353672 POU3F1 JASPAR yes 118252817
chr1 25353660 25353672 POU3F2 JASPAR yes 118252818
chr1 25353661 25353673 POU2F1 JASPAR yes 27555304
chr1 25353661 25353673 POU2F1 JASPAR yes 118252819
chr1 25353662 25353671 POU3F4 JASPAR yes 27555305
chr1 25353662 25353671 POU5F1B JASPAR yes 27555306
chr1 25353662 25353671 POU3F4 JASPAR yes 118252820
chr1 25353662 25353671 POU5F1B JASPAR yes 118252821
chr1 25353678 25353692 NR2F1 JASPAR yes 27555307
chr1 25353678 25353692 RXRB JASPAR yes 27555308
chr1 25353678 25353692 RXRG JASPAR yes 27555309
chr1 25353678 25353692 NR2F1 JASPAR yes 118252822
chr1 25353678 25353692 RXRB JASPAR yes 118252823
chr1 25353678 25353692 RXRG JASPAR yes 118252824
chr1 25353693 25353706 TFAP2A JASPAR yes 27555310
chr1 25353693 25353706 TFAP2B JASPAR yes 27555311
chr1 25353693 25353706 TFAP2C JASPAR yes 27555312
chr1 25353693 25353706 TFAP2A JASPAR yes 118252825
chr1 25353693 25353706 TFAP2B JASPAR yes 118252826
chr1 25353693 25353706 TFAP2C JASPAR yes 118252827
chr1 25353699 25353704 SP1 TRANSFAC yes 27555313
chr1 25353699 25353704 SP1 TRANSFAC yes 118252828
chr1 25353731 25353746 RUNX2 JASPAR yes 27555314
chr1 25353731 25353746 RUNX2 JASPAR yes 118252829
chr1 25353735 25353745 RUNX3 JASPAR yes 27555315
chr1 25353735 25353745 RUNX3 JASPAR yes 118252830
chr1 25353736 25353745 RUNX2 JASPAR yes 27555316
chr1 25353736 25353745 RUNX2 JASPAR yes 118252831
chr1 25353758 25353764 YY1 JASPAR yes 27555317
chr1 25353758 25353764 YY1 JASPAR yes 118252832
chr1 25353762 25353773 ELK4 JASPAR yes 27555318
chr1 25353762 25353773 FLI1 JASPAR yes 27555319
chr1 25353762 25353773 ELK4 JASPAR yes 118252833
chr1 25353762 25353773 FLI1 JASPAR yes 118252834
chr1 25353762 25353777 AR JASPAR yes 27555320
chr1 25353762 25353777 AR JASPAR yes 118252835
chr1 25353763 25353773 ELK1 JASPAR yes 27555321
chr1 25353763 25353773 ELK3 JASPAR yes 27555322
chr1 25353763 25353773 ERF JASPAR yes 27555323
chr1 25353763 25353773 ERG JASPAR yes 27555324
chr1 25353763 25353773 ETS1 JASPAR yes 27555325
chr1 25353763 25353773 ETV1 JASPAR yes 27555326
chr1 25353763 25353773 ETV3 JASPAR yes 27555327
chr1 25353763 25353773 ETV4 JASPAR yes 27555328
chr1 25353763 25353773 ETV6 JASPAR yes 27555329
chr1 25353763 25353773 FEV JASPAR yes 27555330
chr1 25353763 25353773 FLI1 JASPAR yes 27555331
chr1 25353763 25353773 GABPA JASPAR yes 27555332
chr1 25353763 25353773 ELK1 JASPAR yes 118252836
chr1 25353763 25353773 ELK3 JASPAR yes 118252837
chr1 25353763 25353773 ERF JASPAR yes 118252838
chr1 25353763 25353773 ERG JASPAR yes 118252839
chr1 25353763 25353773 ETS1 JASPAR yes 118252840
chr1 25353763 25353773 ETV1 JASPAR yes 118252841
chr1 25353763 25353773 ETV3 JASPAR yes 118252842
chr1 25353763 25353773 ETV4 JASPAR yes 118252843
chr1 25353763 25353773 ETV6 JASPAR yes 118252844
chr1 25353763 25353773 FEV JASPAR yes 118252845
chr1 25353763 25353773 FLI1 JASPAR yes 118252846
chr1 25353763 25353773 GABPA JASPAR yes 118252847
chr1 25353763 25353774 ETV2 JASPAR yes 27555333
chr1 25353763 25353774 ETV2 JASPAR yes 118252848
chr1 25353763 25353775 ELF4 JASPAR yes 27555334
chr1 25353763 25353775 ELF4 JASPAR yes 118252849
chr1 25353763 25353776 ELF1 JASPAR yes 27555335
chr1 25353763 25353776 ELF1 JASPAR yes 118252850
chr1 25353764 25353771 SPI1 JASPAR yes 27555336
chr1 25353764 25353771 SPI1 JASPAR yes 118252851
chr1 25353764 25353772 EHF JASPAR yes 27555337
chr1 25353764 25353772 FEV JASPAR yes 27555338
chr1 25353764 25353772 EHF JASPAR yes 118252852
chr1 25353764 25353772 FEV JASPAR yes 118252853
chr1 25353769 25353785 ZNF143 JASPAR yes 27555339
chr1 25353769 25353785 ZNF143 JASPAR yes 118252854
chr1 25353772 25353786 EBF1 JASPAR yes 27555340
chr1 25353772 25353786 EBF1 JASPAR yes 118252855
chr1 25353773 25353784 EBF1 JASPAR yes 27555341
chr1 25353773 25353784 EBF1 JASPAR yes 118252856
chr1 25353773 25353788 ZIC3 JASPAR yes 27555342
chr1 25353773 25353788 ZIC4 JASPAR yes 27555343
chr1 25353773 25353788 ZIC3 JASPAR yes 118252857
chr1 25353773 25353788 ZIC4 JASPAR yes 118252858
chr1 25353774 25353785 EBF1 JASPAR yes 27555344
chr1 25353774 25353785 EBF1 JASPAR yes 118252859
chr1 25353783 25353791 TBX15 JASPAR yes 27555345
chr1 25353783 25353791 TBX15 JASPAR yes 118252860
chr1 25353784 25353789 SP1 TRANSFAC yes 27555346
chr1 25353784 25353789 SP1 TRANSFAC yes 118252861
chr1 25353792 25353806 ZIC1 JASPAR yes 27555347
chr1 25353792 25353806 ZIC1 JASPAR yes 118252862
chr1 25353800 25353805 SP1 TRANSFAC yes 27555348
chr1 25353800 25353805 SP1 TRANSFAC yes 118252863
chr1 25353814 25353825 ESRRA JASPAR yes 27555349
chr1 25353814 25353825 ESRRB JASPAR yes 27555350
chr1 25353814 25353825 ESRRA JASPAR yes 118252864
chr1 25353814 25353825 ESRRB JASPAR yes 118252865
chr1 25353815 25353823 NR4A2 JASPAR yes 27555351
chr1 25353815 25353823 NR4A2 JASPAR yes 118252866
chr1 25353816 25353826 RORA JASPAR yes 27555352
chr1 25353816 25353826 RORA JASPAR yes 118252867
chr1 25353856 25353866 SREBF1 JASPAR yes 27555353
chr1 25353856 25353866 SREBF1 JASPAR yes 118252868
chr1 25353869 25353873 NFE TRANSFAC yes 27555354
chr1 25353869 25353873 NFE TRANSFAC yes 118252869
SNP sites on vista819[chr1:25353540-25353869]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25353554 rs147545579 T G
ETS1 REST SPI1
170574
chr1 25353583 rs140272683 G A no 170575
chr1 25353692 rs183399512 G C
NR2F1 RXRB RXRG
170576
chr1 25353703 rs13374888 G A
SP1 TFAP2A TFAP2B TFAP2C
170577
chr1 25353794 rs12756137 G A
ZIC1
170578
chr1 25353830 rs116756624 A T no 170579
Genes possibly regulated by vista819[chr1:25353540-25353869]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 38072
Expression level of Genes
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miRNAs possibly regulated by vista819[chr1:25353540-25353869]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results