EnhancerDB
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  3. rs13374888[chr1:25353703]
Enhancers that have rs13374888[chr1:25353703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25342085 25355155 enh148
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Stomach
chr1 25353540 25353869 vista819
VISTA
Transcript factors that have rs13374888[chr1:25353703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25353693 25353706 TFAP2A JASPAR yes 27555310
chr1 25353693 25353706 TFAP2B JASPAR yes 27555311
chr1 25353693 25353706 TFAP2C JASPAR yes 27555312
chr1 25353693 25353706 TFAP2A JASPAR yes 118252825
chr1 25353693 25353706 TFAP2B JASPAR yes 118252826
chr1 25353693 25353706 TFAP2C JASPAR yes 118252827
chr1 25353699 25353704 SP1 TRANSFAC yes 27555313
chr1 25353699 25353704 SP1 TRANSFAC yes 118252828
Genes associated with rs13374888[chr1:25353703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More