EnhancerDB
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  3. vista821[chr1:25355154-25355297]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista821[chr1:25355154-25355297]
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Tissue distribution of vista821
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Transcription factor that possibly regulate vista821[chr1:25355154-25355297]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 25355160 25355169 THAP1 JASPAR yes 118252884
chr1 25355163 25355167 LFA1 TRANSFAC yes 118252885
chr1 25355176 25355188 PROX1 JASPAR yes 118252886
chr1 25355180 25355201 ZNF263 JASPAR yes 27555525
chr1 25355180 25355201 ZNF263 JASPAR yes 118252887
chr1 25355220 25355233 ELF1 JASPAR yes 27555526
chr1 25355220 25355233 ELF1 JASPAR yes 118252888
chr1 25355220 25355234 SPI1 JASPAR yes 27555527
chr1 25355220 25355234 SPIC JASPAR yes 27555528
chr1 25355220 25355234 SPI1 JASPAR yes 118252889
chr1 25355220 25355234 SPIC JASPAR yes 118252890
chr1 25355244 25355255 FOXA1 JASPAR yes 27555529
chr1 25355244 25355255 FOXA1 JASPAR yes 118252891
chr1 25355244 25355259 FOXA1 JASPAR yes 27555530
chr1 25355244 25355259 FOXA1 JASPAR yes 118252892
chr1 25355266 25355277 EBF1 JASPAR yes 27555531
chr1 25355266 25355277 EBF1 JASPAR yes 118252893
chr1 25355273 25355278 SP1 TRANSFAC yes 27555532
chr1 25355273 25355278 SP1 TRANSFAC yes 118252894
chr1 25355279 25355294 TFAP2A JASPAR yes 27555533
chr1 25355279 25355294 TFAP2A JASPAR yes 118252895
chr1 25355296 25355317 REST JASPAR yes 27555534
chr1 25355296 25355317 REST JASPAR yes 118252896
chr1 25355297 25355316 REST JASPAR yes 27555535
chr1 25355297 25355316 REST JASPAR yes 118252897
SNP sites on vista821[chr1:25355154-25355297]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 25355234 rs115067735 A G
SPI1 SPIC
170598
chr1 25355280 rs1507100 G T
TFAP2A
170599
Genes possibly regulated by vista821[chr1:25355154-25355297]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 25226002 25291612 - RUNX3 ENSG00000020633.14 25291612 0.9 1.0 338 36458
Expression level of Genes
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miRNAs possibly regulated by vista821[chr1:25355154-25355297]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results