EnhancerDB
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  3. rs1507100[chr1:25355280]
Enhancers that have rs1507100[chr1:25355280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355154 25355297 vista821
VISTA
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
Transcript factors that have rs1507100[chr1:25355280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25354896 25355383 TCF7L2 GTRD no Colon (HCT116) 107802490
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802491
chr1 25354912 25357346 ZNF274 GTRD no Bone Marrow (K562) 107802492
chr1 25355056 25358083 ZNF274 GTRD no Bone Marrow (K562) 107802493
chr1 25355279 25355294 TFAP2A JASPAR yes 27555533
chr1 25355279 25355294 TFAP2A JASPAR yes 118252895
Genes associated with rs1507100[chr1:25355280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More