EnhancerDB
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  3. vista882[chr1:27021406-27021810]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista882[chr1:27021406-27021810]
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Tissue distribution of vista882
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Transcription factor that possibly regulate vista882[chr1:27021406-27021810]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27021500 27025301 POLR2A UCSC Txn Factor no Conserved 107802551
chr1 27021408 27021420 YY1 JASPAR yes 27649153
chr1 27021408 27021420 YY1 JASPAR yes 118256106
chr1 27021413 27021417 YY1 TRANSFAC yes 27649154
chr1 27021413 27021417 YY1 TRANSFAC yes 118256107
chr1 27021451 27021463 YY1 JASPAR yes 27649155
chr1 27021451 27021463 YY1 JASPAR yes 118256108
chr1 27021456 27021460 YY1 TRANSFAC yes 27649156
chr1 27021456 27021460 YY1 TRANSFAC yes 118256109
chr1 27021474 27021483 SOX9 JASPAR yes 27649157
chr1 27021474 27021483 SOX9 JASPAR yes 118256110
chr1 27021490 27021508 NR3C1 JASPAR yes 27649158
chr1 27021490 27021508 NR3C1 JASPAR yes 118256111
chr1 27021500 27021515 FOXP1 JASPAR yes 27649159
chr1 27021500 27021515 FOXP1 JASPAR yes 118256112
chr1 27021501 27021516 FOXP1 JASPAR yes 27649160
chr1 27021501 27021516 FOXP1 JASPAR yes 118256113
chr1 27021502 27021517 FOXP1 JASPAR yes 27649161
chr1 27021502 27021517 FOXP1 JASPAR yes 118256114
chr1 27021563 27021582 PAX5 JASPAR yes 27649162
chr1 27021563 27021582 PAX5 JASPAR yes 118256115
chr1 27021564 27021581 RARA JASPAR yes 27649163
chr1 27021564 27021581 RXRA JASPAR yes 27649164
chr1 27021564 27021581 RARA JASPAR yes 118256116
chr1 27021564 27021581 RXRA JASPAR yes 118256117
chr1 27021574 27021589 HNF4A JASPAR yes 27649165
chr1 27021574 27021589 HNF4A JASPAR yes 118256118
chr1 27021575 27021589 RXRB JASPAR yes 27649166
chr1 27021575 27021589 RXRG JASPAR yes 27649167
chr1 27021575 27021589 RXRB JASPAR yes 118256119
chr1 27021575 27021589 RXRG JASPAR yes 118256120
chr1 27021575 27021590 HNF4G JASPAR yes 27649168
chr1 27021575 27021590 HNF4G JASPAR yes 118256121
chr1 27021589 27021602 SMAD2 JASPAR yes 27649169
chr1 27021589 27021602 SMAD2 JASPAR yes 118256122
chr1 27021591 27021599 MEIS3 JASPAR yes 27649170
chr1 27021591 27021599 MEIS3 JASPAR yes 118256123
chr1 27021600 27021611 E2F6 JASPAR yes 27649171
chr1 27021600 27021611 E2F6 JASPAR yes 118256124
chr1 27021612 27021627 STAT2 JASPAR yes 27649172
chr1 27021612 27021627 STAT2 JASPAR yes 118256125
chr1 27021613 27021627 STAT1 JASPAR yes 27649173
chr1 27021613 27021627 STAT1 JASPAR yes 118256126
chr1 27021632 27021637 TFAP2A TRANSFAC yes 27649174
chr1 27021632 27021637 TFAP2A TRANSFAC yes 118256127
chr1 27021632 27021638 MZF1 JASPAR yes 27649175
chr1 27021632 27021638 MZF1 JASPAR yes 118256128
chr1 27021635 27021640 GATA2 JASPAR yes 27649176
chr1 27021635 27021640 GATA2 JASPAR yes 118256129
chr1 27021637 27021645 OTX1 JASPAR yes 27649177
chr1 27021637 27021645 OTX1 JASPAR yes 118256130
chr1 27021653 27021664 EBF1 JASPAR yes 27649178
chr1 27021653 27021664 EBF1 JASPAR yes 118256131
chr1 27021677 27021687 EVX2 JASPAR yes 27649179
chr1 27021677 27021687 GSX1 JASPAR yes 27649180
chr1 27021677 27021687 HOXA2 JASPAR yes 27649181
chr1 27021677 27021687 NOTO JASPAR yes 27649182
chr1 27021677 27021687 EVX2 JASPAR yes 118256132
chr1 27021677 27021687 GSX1 JASPAR yes 118256133
chr1 27021677 27021687 HOXA2 JASPAR yes 118256134
chr1 27021677 27021687 NOTO JASPAR yes 118256135
chr1 27021682 27021691 THAP1 JASPAR yes 27649183
chr1 27021682 27021691 THAP1 JASPAR yes 118256136
chr1 27021683 27021702 PAX5 JASPAR yes 27649184
chr1 27021683 27021702 PAX5 JASPAR yes 118256137
chr1 27021685 27021689 LFA1 TRANSFAC yes 27649185
chr1 27021685 27021689 LFA1 TRANSFAC yes 118256138
chr1 27021713 27021722 SOX9 JASPAR yes 27649186
chr1 27021713 27021722 SOX9 JASPAR yes 118256139
chr1 27021714 27021730 SOX8 JASPAR yes 27649187
chr1 27021714 27021730 SOX8 JASPAR yes 118256140
chr1 27021722 27021733 BATF JASPAR yes 27649188
chr1 27021722 27021733 BATF JASPAR yes 118256141
chr1 27021741 27021747 TCF4 TRANSFAC yes 27649189
chr1 27021741 27021747 TCF4 TRANSFAC yes 118256142
chr1 27021752 27021758 TBP TRANSFAC yes 27649190
chr1 27021752 27021758 TBP TRANSFAC yes 118256143
chr1 27021776 27021780 H4TF2 TRANSFAC yes 27649191
chr1 27021776 27021780 H4TF2 TRANSFAC yes 118256144
chr1 27021786 27021800 TCF7L2 JASPAR yes 27649192
chr1 27021786 27021800 TCF7L2 JASPAR yes 118256145
SNP sites on vista882[chr1:27021406-27021810]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27021684 rs6598860 G A
EVX2 GSX1 HOXA2 NOTO PAX5 POLR2A THAP1
181638
chr1 27021697 rs115117774 T C
PAX5 POLR2A
181639
chr1 27021738 rs141063435 G C
POLR2A
181640
Genes possibly regulated by vista882[chr1:27021406-27021810]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27022524 27108595 + ARID1A ENSG00000117713.13 27022524 0.75 1.0 373 99286
chr1 27113963 27124889 + PIGV ENSG00000060642.6 27113963 0.61 1.0 374 7847
Expression level of Genes
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miRNAs possibly regulated by vista882[chr1:27021406-27021810]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results