EnhancerDB
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  3. vista886[chr1:27154983-27155478]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista886[chr1:27154983-27155478]
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Tissue distribution of vista886
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Transcription factor that possibly regulate vista886[chr1:27154983-27155478]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27155021 27155036 TFAP2A JASPAR yes 118256304
chr1 27155021 27155036 TFAP2C JASPAR yes 118256305
chr1 27155023 27155037 EBF1 JASPAR yes 118256306
chr1 27155024 27155035 EBF1 JASPAR yes 118256307
chr1 27155027 27155038 ESRRA JASPAR yes 118256308
chr1 27155028 27155046 ESR2 JASPAR yes 118256309
chr1 27155031 27155035 LFA1 TRANSFAC yes 118256310
chr1 27155032 27155042 TFEB JASPAR yes 118256311
chr1 27155032 27155043 USF1 JASPAR yes 118256312
chr1 27155032 27155043 USF2 JASPAR yes 118256313
chr1 27155032 27155051 RFX2 JASPAR yes 118256314
chr1 27155034 27155049 RFX5 JASPAR yes 118256315
chr1 27155036 27155052 RFX2 JASPAR yes 118256316
chr1 27155036 27155052 RFX5 JASPAR yes 118256317
chr1 27155050 27155066 RFX3 JASPAR yes 118256318
chr1 27155052 27155056 NFE TRANSFAC yes 118256319
chr1 27155066 27155073 SP1 TRANSFAC yes 118256320
chr1 27155067 27155072 SP1 TRANSFAC yes 118256321
chr1 27155067 27155073 SP1 TRANSFAC yes 118256322
chr1 27155067 27155074 SP1 TRANSFAC yes 118256323
chr1 27155068 27155080 TFAP2A JASPAR yes 118256324
chr1 27155068 27155080 TFAP2B JASPAR yes 118256325
chr1 27155068 27155080 TFAP2C JASPAR yes 118256326
chr1 27155102 27155107 GATA1 TRANSFAC yes 118256327
chr1 27155111 27155123 IRF1 JASPAR yes 118256328
chr1 27155114 27155124 RELA JASPAR yes 118256329
chr1 27155115 27155126 NFKB1 JASPAR yes 118256330
chr1 27155141 27155156 STAT1 JASPAR yes 118256331
chr1 27155142 27155149 SPI1 JASPAR yes 118256332
chr1 27155143 27155154 STAT1 JASPAR yes 118256333
chr1 27155148 27155152 TEAD2 TRANSFAC yes 118256334
chr1 27155148 27155153 TBP TRANSFAC yes 118256335
chr1 27155148 27155154 TMF TRANSFAC yes 118256336
chr1 27155174 27155189 RUNX2 JASPAR yes 118256337
chr1 27155175 27155178 MYB TRANSFAC yes 118256338
chr1 27155175 27155185 RUNX3 JASPAR yes 118256339
chr1 27155181 27155196 NR2C2 JASPAR yes 118256340
chr1 27155207 27155224 RXRA JASPAR yes 118256341
chr1 27155208 27155214 ZNF354C JASPAR yes 118256342
chr1 27155209 27155227 RARA JASPAR yes 118256343
chr1 27155210 27155215 GATA2 JASPAR yes 118256344
chr1 27155213 27155229 SOX8 JASPAR yes 118256345
chr1 27155220 27155234 PAX6 JASPAR yes 118256346
chr1 27155229 27155240 HOXC13 JASPAR yes 118256347
chr1 27155241 27155255 PLAG1 JASPAR yes 118256348
chr1 27155242 27155257 ZIC4 JASPAR yes 118256349
chr1 27155251 27155256 SP1 TRANSFAC yes 118256350
chr1 27155273 27155294 IRF1 JASPAR yes 118256351
chr1 27155285 27155291 ZNF354C JASPAR yes 118256352
chr1 27155302 27155313 USF1 JASPAR yes 118256353
chr1 27155302 27155313 USF2 JASPAR yes 118256354
chr1 27155318 27155329 NFKB1 JASPAR yes 118256355
chr1 27155336 27155341 GATA2 JASPAR yes 118256356
chr1 27155337 27155348 EBF1 JASPAR yes 118256357
chr1 27155359 27155365 MZF1 JASPAR yes 118256358
chr1 27155385 27155398 ELF1 JASPAR yes 118256359
chr1 27155388 27155394 PEA3 TRANSFAC yes 118256360
chr1 27155388 27155399 FLI1 JASPAR yes 118256361
chr1 27155411 27155425 RORA JASPAR yes 118256362
chr1 27155412 27155422 RORA JASPAR yes 118256363
chr1 27155414 27155425 USF2 JASPAR yes 118256364
chr1 27155415 27155425 TFE3 JASPAR yes 118256365
chr1 27155415 27155425 TFEB JASPAR yes 118256366
chr1 27155415 27155426 USF1 JASPAR yes 118256367
chr1 27155417 27155430 NR2F1 JASPAR yes 118256368
chr1 27155420 27155431 NFE2L2 JASPAR yes 118256369
chr1 27155436 27155457 REST JASPAR yes 118256370
chr1 27155437 27155456 REST JASPAR yes 118256371
chr1 27155446 27155449 MYB TRANSFAC yes 118256372
SNP sites on vista886[chr1:27154983-27155478]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27155044 rs144425033 A G
ESR2 RFX2 RFX5
182417
chr1 27155150 rs148398744 A G
STAT1 TBP TEAD2 TMF
182418
chr1 27155166 rs60314236 C T no 182419
chr1 27155243 rs531388541 AAGCTCTGGGGGGCCCAGAGCTC A
PLAG1 ZIC4
182420
chr1 27155257 rs77743440 C T
ZIC4
182421
chr1 27155274 rs112510910 G A
IRF1
182422
Genes possibly regulated by vista886[chr1:27154983-27155478]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27113963 27124889 + PIGV ENSG00000060642.6 27113963 0.61 1.0 374 58980
chr1 27153201 27184093 + ZDHHC18 ENSG00000204160.7 27153201 0.75 1.0 375 98218
chr1 27189633 27190947 + SFN ENSG00000175793.10 27189633 0.98 1.0 376 65845
chr1 27202624 27216788 - GPN2 ENSG00000142751.10 27216788 0.72 1.0 377 38690
chr1 27216979 27226957 - GPATCH3 ENSG00000198746.8 27226957 0.52 0.99 378 28521
chr1 27226729 27273353 + NUDC ENSG00000090273.9 27226729 0.65 0.99 379 28749
chr1 27237980 27240457 - NR0B2 ENSG00000131910.4 27240457 0.96 0.98 380 15021
Expression level of Genes
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miRNAs possibly regulated by vista886[chr1:27154983-27155478]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results