EnhancerDB
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  3. vista916[chr1:27848725-27849287]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista916[chr1:27848725-27849287]
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Tissue distribution of vista916
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Transcription factor that possibly regulate vista916[chr1:27848725-27849287]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27848726 27848746 TP63 JASPAR yes 27704575
chr1 27848726 27848746 TP63 JASPAR yes 118257790
chr1 27848747 27848762 AR JASPAR yes 27704576
chr1 27848747 27848762 AR JASPAR yes 118257791
chr1 27848772 27848787 ZIC3 JASPAR yes 27704577
chr1 27848772 27848787 ZIC4 JASPAR yes 27704578
chr1 27848772 27848787 ZIC3 JASPAR yes 118257792
chr1 27848772 27848787 ZIC4 JASPAR yes 118257793
chr1 27848773 27848787 ZIC1 JASPAR yes 27704579
chr1 27848773 27848787 ZIC1 JASPAR yes 118257794
chr1 27848776 27848785 SNAI2 JASPAR yes 27704580
chr1 27848776 27848785 SNAI2 JASPAR yes 118257795
chr1 27848803 27848818 RFX5 JASPAR yes 27704581
chr1 27848803 27848818 RFX5 JASPAR yes 118257796
chr1 27848810 27848817 ETS1 TRANSFAC yes 27704582
chr1 27848810 27848817 ETS1 TRANSFAC yes 118257797
chr1 27848811 27848819 EHF JASPAR yes 27704583
chr1 27848811 27848819 EHF JASPAR yes 118257798
chr1 27848862 27848880 E2F3 JASPAR yes 27704584
chr1 27848862 27848880 E2F3 JASPAR yes 118257799
chr1 27848863 27848879 E2F2 JASPAR yes 27704585
chr1 27848863 27848879 E2F2 JASPAR yes 118257800
chr1 27848865 27848877 E2F1 JASPAR yes 27704586
chr1 27848865 27848877 E2F1 JASPAR yes 118257801
chr1 27848877 27848886 HIC2 JASPAR yes 27704587
chr1 27848877 27848886 HIC2 JASPAR yes 118257802
chr1 27848889 27848895 SOX10 JASPAR yes 27704588
chr1 27848889 27848895 SOX10 JASPAR yes 118257803
chr1 27848892 27848907 RUNX2 JASPAR yes 27704589
chr1 27848892 27848907 RUNX2 JASPAR yes 118257804
chr1 27848894 27848914 RREB1 JASPAR yes 27704590
chr1 27848894 27848914 RREB1 JASPAR yes 118257805
chr1 27848895 27848907 GLI2 JASPAR yes 27704591
chr1 27848895 27848907 GLI2 JASPAR yes 118257806
chr1 27848896 27848906 RUNX3 JASPAR yes 27704592
chr1 27848896 27848906 RUNX3 JASPAR yes 118257807
chr1 27848907 27848921 JUN JASPAR yes 27704593
chr1 27848907 27848921 JUN JASPAR yes 118257808
chr1 27848910 27848921 FOSL2 JASPAR yes 27704594
chr1 27848910 27848921 JUNB JASPAR yes 27704595
chr1 27848910 27848921 FOSL2 JASPAR yes 118257809
chr1 27848910 27848921 JUNB JASPAR yes 118257810
chr1 27848911 27848922 FOS JASPAR yes 27704596
chr1 27848911 27848922 FOSL1 JASPAR yes 27704597
chr1 27848911 27848922 JUND JASPAR yes 27704598
chr1 27848911 27848922 FOS JASPAR yes 118257811
chr1 27848911 27848922 FOSL1 JASPAR yes 118257812
chr1 27848911 27848922 JUND JASPAR yes 118257813
chr1 27848912 27848919 JUN TRANSFAC yes 27704599
chr1 27848912 27848919 JUN TRANSFAC yes 118257814
chr1 27848921 27848936 AR JASPAR yes 27704600
chr1 27848921 27848936 AR JASPAR yes 118257815
chr1 27848921 27848938 NR3C1 JASPAR yes 27704601
chr1 27848921 27848938 NR3C2 JASPAR yes 27704602
chr1 27848921 27848938 NR3C1 JASPAR yes 118257816
chr1 27848921 27848938 NR3C2 JASPAR yes 118257817
chr1 27848961 27848976 AR JASPAR yes 27704603
chr1 27848961 27848976 AR JASPAR yes 118257818
chr1 27848978 27848998 RREB1 JASPAR yes 27704604
chr1 27848978 27848998 RREB1 JASPAR yes 118257819
chr1 27848984 27848999 RUNX2 JASPAR yes 27704605
chr1 27848984 27848999 RUNX2 JASPAR yes 118257820
chr1 27848987 27848998 RUNX1 JASPAR yes 27704606
chr1 27848987 27848998 RUNX1 JASPAR yes 118257821
chr1 27848987 27848999 ZBTB7C JASPAR yes 27704607
chr1 27848987 27848999 ZBTB7C JASPAR yes 118257822
chr1 27848988 27848998 RUNX3 JASPAR yes 27704608
chr1 27848988 27848998 RUNX3 JASPAR yes 118257823
chr1 27848988 27849000 ZBTB7A JASPAR yes 27704609
chr1 27848988 27849000 ZBTB7A JASPAR yes 118257824
chr1 27848998 27849002 YY1 TRANSFAC yes 27704610
chr1 27848998 27849002 YY1 TRANSFAC yes 118257825
chr1 27849007 27849013 SP1 TRANSFAC yes 27704611
chr1 27849007 27849013 SP1 TRANSFAC yes 118257826
chr1 27849008 27849013 SP1 TRANSFAC yes 27704612
chr1 27849008 27849013 SP1 TRANSFAC yes 118257827
chr1 27849021 27849033 ZBTB7C JASPAR yes 27704613
chr1 27849021 27849033 ZBTB7C JASPAR yes 118257828
chr1 27849048 27849061 SCRT2 JASPAR yes 27704614
chr1 27849048 27849061 SCRT2 JASPAR yes 118257829
chr1 27849048 27849063 SCRT1 JASPAR yes 27704615
chr1 27849048 27849063 SCRT1 JASPAR yes 118257830
chr1 27849051 27849071 TP63 JASPAR yes 27704616
chr1 27849051 27849071 TP63 JASPAR yes 118257831
chr1 27849052 27849070 TP53 JASPAR yes 27704617
chr1 27849052 27849070 TP73 JASPAR yes 27704618
chr1 27849052 27849070 TP53 JASPAR yes 118257832
chr1 27849052 27849070 TP73 JASPAR yes 118257833
chr1 27849054 27849069 TP53 JASPAR yes 27704619
chr1 27849054 27849069 TP53 JASPAR yes 118257834
chr1 27849059 27849074 SCRT1 JASPAR yes 27704620
chr1 27849059 27849074 SCRT1 JASPAR yes 118257835
chr1 27849061 27849074 SCRT2 JASPAR yes 27704621
chr1 27849061 27849074 SCRT2 JASPAR yes 118257836
chr1 27849115 27849129 MTF1 JASPAR yes 27704622
chr1 27849115 27849129 MTF1 JASPAR yes 118257837
chr1 27849146 27849161 RUNX2 JASPAR yes 27704623
chr1 27849146 27849161 RUNX2 JASPAR yes 118257838
chr1 27849164 27849185 ZNF263 JASPAR yes 27704624
chr1 27849164 27849185 ZNF263 JASPAR yes 118257839
chr1 27849167 27849188 ZNF263 JASPAR yes 27704625
chr1 27849167 27849188 ZNF263 JASPAR yes 118257840
chr1 27849168 27849175 CEBPA TRANSFAC yes 27704626
chr1 27849168 27849175 CEBPA TRANSFAC yes 118257841
chr1 27849170 27849185 NR2C2 JASPAR yes 27704627
chr1 27849170 27849185 NR2C2 JASPAR yes 118257842
chr1 27849172 27849178 SP1 TRANSFAC yes 27704628
chr1 27849172 27849178 SP1 TRANSFAC yes 118257843
chr1 27849173 27849178 SP1 TRANSFAC yes 27704629
chr1 27849173 27849178 SP1 TRANSFAC yes 118257844
chr1 27849190 27849210 TP63 JASPAR yes 27704630
chr1 27849190 27849210 TP63 JASPAR yes 118257845
chr1 27849193 27849208 TP53 JASPAR yes 27704631
chr1 27849193 27849208 TP53 JASPAR yes 118257846
chr1 27849195 27849206 FOXA1 JASPAR yes 27704632
chr1 27849195 27849206 FOXA1 JASPAR yes 118257847
chr1 27849216 27849229 NR2F1 JASPAR yes 27704633
chr1 27849216 27849229 NR2F1 JASPAR yes 118257848
chr1 27849220 27849224 ESR1 TRANSFAC yes 27704634
chr1 27849220 27849224 ESR1 TRANSFAC yes 118257849
chr1 27849233 27849243 MAX JASPAR yes 27704635
chr1 27849233 27849243 MAX JASPAR yes 118257850
chr1 27849254 27849263 SNAI2 JASPAR yes 27704636
chr1 27849254 27849263 SNAI2 JASPAR yes 118257851
chr1 27849267 27849284 PAX1 JASPAR yes 27704637
chr1 27849267 27849284 PAX9 JASPAR yes 27704638
chr1 27849267 27849284 PAX1 JASPAR yes 118257852
chr1 27849267 27849284 PAX9 JASPAR yes 118257853
chr1 27849279 27849299 RREB1 JASPAR yes 27704639
chr1 27849279 27849299 RREB1 JASPAR yes 118257854
chr1 27849282 27849288 SOX10 JASPAR yes 27704640
chr1 27849282 27849288 SOX10 JASPAR yes 118257855
SNP sites on vista916[chr1:27848725-27849287]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27848975 rs149441335 A G
AR
186575
chr1 27849027 rs575420849 T C
ZBTB7C
186576
chr1 27849111 rs182127420 G A no 186577
chr1 27849129 rs191751206 C T
MTF1
186578
chr1 27849192 rs537221747 G A,T
TP63
186579
chr1 27849222 rs116541404 G T
ESR1 NR2F1
186580
Genes possibly regulated by vista916[chr1:27848725-27849287]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 67944
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 18345
Expression level of Genes
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miRNAs possibly regulated by vista916[chr1:27848725-27849287]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results