EnhancerDB
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  3. vista919[chr1:27854575-27854919]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista919[chr1:27854575-27854919]
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Tissue distribution of vista919
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Transcription factor that possibly regulate vista919[chr1:27854575-27854919]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27854556 27854577 ZNF263 JASPAR yes 27705463
chr1 27854556 27854577 ZNF263 JASPAR yes 118258084
chr1 27854557 27854578 ZNF263 JASPAR yes 27705465
chr1 27854557 27854578 ZNF263 JASPAR yes 118258085
chr1 27854560 27854581 ZNF263 JASPAR yes 27705466
chr1 27854560 27854581 ZNF263 JASPAR yes 118258086
chr1 27854570 27854577 CEBPA TRANSFAC yes 27705467
chr1 27854570 27854577 CEBPA TRANSFAC yes 118258087
chr1 27854571 27854582 E2F6 JASPAR yes 27705468
chr1 27854571 27854582 E2F6 JASPAR yes 118258088
chr1 27854578 27854591 TFAP2A JASPAR yes 27705469
chr1 27854578 27854591 TFAP2B JASPAR yes 27705470
chr1 27854578 27854591 TFAP2C JASPAR yes 27705471
chr1 27854578 27854591 TFAP2A JASPAR yes 118258089
chr1 27854578 27854591 TFAP2B JASPAR yes 118258090
chr1 27854578 27854591 TFAP2C JASPAR yes 118258091
chr1 27854583 27854598 ZIC3 JASPAR yes 27705472
chr1 27854583 27854598 ZIC4 JASPAR yes 27705473
chr1 27854583 27854598 ZIC3 JASPAR yes 118258092
chr1 27854583 27854598 ZIC4 JASPAR yes 118258093
chr1 27854584 27854598 ZIC1 JASPAR yes 27705474
chr1 27854584 27854598 ZIC1 JASPAR yes 118258094
chr1 27854594 27854598 LFA1 TRANSFAC yes 27705475
chr1 27854594 27854598 LFA1 TRANSFAC yes 118258095
chr1 27854594 27854606 NHLH1 JASPAR yes 27705476
chr1 27854594 27854606 NHLH1 JASPAR yes 118258096
chr1 27854595 27854605 NHLH1 JASPAR yes 27705477
chr1 27854595 27854605 NHLH1 JASPAR yes 118258097
chr1 27854606 27854610 LFA1 TRANSFAC yes 27705478
chr1 27854606 27854610 LFA1 TRANSFAC yes 118258098
chr1 27854621 27854626 SP1 TRANSFAC yes 27705479
chr1 27854621 27854626 SP1 TRANSFAC yes 118258099
chr1 27854621 27854627 SP1 TRANSFAC yes 27705480
chr1 27854621 27854627 SP1 TRANSFAC yes 118258100
chr1 27854627 27854631 YY1 TRANSFAC yes 27705481
chr1 27854627 27854631 YY1 TRANSFAC yes 118258101
chr1 27854649 27854665 RFX5 JASPAR yes 27705482
chr1 27854649 27854665 RFX5 JASPAR yes 118258102
chr1 27854650 27854669 RFX2 JASPAR yes 27705483
chr1 27854650 27854669 RFX2 JASPAR yes 118258103
chr1 27854652 27854667 RFX5 JASPAR yes 27705484
chr1 27854652 27854667 RFX5 JASPAR yes 118258104
chr1 27854665 27854681 GLIS1 JASPAR yes 27705485
chr1 27854665 27854681 GLIS1 JASPAR yes 118258105
chr1 27854684 27854689 SP1 TRANSFAC yes 27705486
chr1 27854684 27854689 SP1 TRANSFAC yes 118258106
chr1 27854685 27854690 SP1 TRANSFAC yes 27705487
chr1 27854685 27854690 SP1 TRANSFAC yes 118258107
chr1 27854685 27854694 THAP1 JASPAR yes 27705488
chr1 27854685 27854694 THAP1 JASPAR yes 118258108
chr1 27854687 27854698 NFKB1 JASPAR yes 27705489
chr1 27854687 27854698 NFKB1 JASPAR yes 118258109
chr1 27854688 27854692 LFA1 TRANSFAC yes 27705490
chr1 27854688 27854692 LFA1 TRANSFAC yes 118258110
chr1 27854688 27854698 NFKB1 JASPAR yes 27705491
chr1 27854688 27854698 NFKB1 JASPAR yes 118258111
chr1 27854692 27854703 TFAP2A JASPAR yes 27705492
chr1 27854692 27854703 TFAP2B JASPAR yes 27705493
chr1 27854692 27854703 TFAP2C JASPAR yes 27705494
chr1 27854692 27854703 TFAP2A JASPAR yes 118258112
chr1 27854692 27854703 TFAP2B JASPAR yes 118258113
chr1 27854692 27854703 TFAP2C JASPAR yes 118258114
chr1 27854693 27854702 TFAP2A JASPAR yes 27705495
chr1 27854693 27854702 TFAP2A JASPAR yes 118258115
chr1 27854715 27854725 SP1 JASPAR yes 27705496
chr1 27854715 27854725 SP1 JASPAR yes 118258116
chr1 27854717 27854736 CTCF JASPAR yes 27705497
chr1 27854717 27854736 CTCF JASPAR yes 118258117
chr1 27854718 27854731 SCRT2 JASPAR yes 27705498
chr1 27854718 27854731 SCRT2 JASPAR yes 118258118
chr1 27854718 27854733 SCRT1 JASPAR yes 27705499
chr1 27854718 27854733 SCRT1 JASPAR yes 118258119
chr1 27854722 27854731 SNAI2 JASPAR yes 27705500
chr1 27854722 27854731 SNAI2 JASPAR yes 118258120
chr1 27854734 27854745 NRF1 JASPAR yes 27705501
chr1 27854734 27854745 NRF1 JASPAR yes 118258121
chr1 27854741 27854745 LFA1 TRANSFAC yes 27705502
chr1 27854741 27854745 LFA1 TRANSFAC yes 118258122
chr1 27854762 27854774 E2F1 JASPAR yes 27705503
chr1 27854762 27854774 E2F1 JASPAR yes 118258123
chr1 27854764 27854778 PLAG1 JASPAR yes 27705504
chr1 27854764 27854778 PLAG1 JASPAR yes 118258124
chr1 27854779 27854790 TFAP2A JASPAR yes 27705505
chr1 27854779 27854790 TFAP2B JASPAR yes 27705506
chr1 27854779 27854790 TFAP2A JASPAR yes 118258125
chr1 27854779 27854790 TFAP2B JASPAR yes 118258126
chr1 27854780 27854789 TFAP2A JASPAR yes 27705507
chr1 27854780 27854789 TFAP2A JASPAR yes 118258127
chr1 27854784 27854795 E2F1 JASPAR yes 27705508
chr1 27854784 27854795 E2F1 JASPAR yes 118258128
chr1 27854789 27854799 ID4 JASPAR yes 27705509
chr1 27854789 27854799 TCF3 JASPAR yes 27705510
chr1 27854789 27854799 TCF4 JASPAR yes 27705511
chr1 27854789 27854799 ID4 JASPAR yes 118258129
chr1 27854789 27854799 TCF3 JASPAR yes 118258130
chr1 27854789 27854799 TCF4 JASPAR yes 118258131
chr1 27854791 27854800 ZEB1 JASPAR yes 27705512
chr1 27854791 27854800 ZEB1 JASPAR yes 118258132
chr1 27854808 27854819 E2F1 JASPAR yes 27705513
chr1 27854808 27854819 E2F1 JASPAR yes 118258133
chr1 27854812 27854817 SP1 TRANSFAC yes 27705514
chr1 27854812 27854817 SP1 TRANSFAC yes 118258134
chr1 27854824 27854829 SP1 TRANSFAC yes 27705515
chr1 27854824 27854829 SP1 TRANSFAC yes 118258135
chr1 27854839 27854845 MZF1 JASPAR yes 27705516
chr1 27854839 27854845 MZF1 JASPAR yes 118258136
chr1 27854841 27854851 ID4 JASPAR yes 27705517
chr1 27854841 27854851 TCF3 JASPAR yes 27705518
chr1 27854841 27854851 TCF4 JASPAR yes 27705519
chr1 27854841 27854851 ID4 JASPAR yes 118258137
chr1 27854841 27854851 TCF3 JASPAR yes 118258138
chr1 27854841 27854851 TCF4 JASPAR yes 118258139
chr1 27854859 27854874 TFAP2A JASPAR yes 27705520
chr1 27854859 27854874 TFAP2A JASPAR yes 118258140
chr1 27854861 27854870 TFAP2A JASPAR yes 27705521
chr1 27854861 27854870 TFAP2A JASPAR yes 118258141
chr1 27854875 27854886 ESRRA JASPAR yes 27705522
chr1 27854875 27854886 ESRRB JASPAR yes 27705523
chr1 27854875 27854886 ESRRA JASPAR yes 118258142
chr1 27854875 27854886 ESRRB JASPAR yes 118258143
chr1 27854884 27854894 HINFP JASPAR yes 27705524
chr1 27854884 27854894 HINFP JASPAR yes 118258144
chr1 27854904 27854917 NFKB2 JASPAR yes 27705525
chr1 27854904 27854917 NFKB2 JASPAR yes 118258145
SNP sites on vista919[chr1:27854575-27854919]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27854619 rs546417705 T C no 186639
chr1 27854843 rs116204917 C T
ID4 MZF1 TCF3 TCF4
186640
Genes possibly regulated by vista919[chr1:27854575-27854919]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 62094
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 23977
Expression level of Genes
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miRNAs possibly regulated by vista919[chr1:27854575-27854919]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results