EnhancerDB
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  3. rs116204917[chr1:27854843]
Enhancers that have rs116204917[chr1:27854843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27854575 27854919 vista919
VISTA
Transcript factors that have rs116204917[chr1:27854843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27854839 27854845 MZF1 JASPAR yes 27705516
chr1 27854839 27854845 MZF1 JASPAR yes 118258136
chr1 27854841 27854851 ID4 JASPAR yes 27705517
chr1 27854841 27854851 TCF3 JASPAR yes 27705518
chr1 27854841 27854851 TCF4 JASPAR yes 27705519
chr1 27854841 27854851 ID4 JASPAR yes 118258137
chr1 27854841 27854851 TCF3 JASPAR yes 118258138
chr1 27854841 27854851 TCF4 JASPAR yes 118258139
Genes associated with rs116204917[chr1:27854843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More