EnhancerDB
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  3. vista921[chr1:27869425-27869556]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista921[chr1:27869425-27869556]
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Tissue distribution of vista921
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Transcription factor that possibly regulate vista921[chr1:27869425-27869556]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27869421 27869426 TFAP2A TRANSFAC yes 27707369
chr1 27869421 27869426 TFAP2A TRANSFAC yes 118258182
chr1 27869421 27869427 MZF1 JASPAR yes 27707370
chr1 27869421 27869427 MZF1 JASPAR yes 118258183
chr1 27869423 27869428 ETS2 TRANSFAC yes 27707371
chr1 27869423 27869428 ETS2 TRANSFAC yes 118258184
chr1 27869447 27869456 THAP1 JASPAR yes 27707372
chr1 27869447 27869456 THAP1 JASPAR yes 118258185
chr1 27869450 27869454 LFA1 TRANSFAC yes 27707373
chr1 27869450 27869454 LFA1 TRANSFAC yes 118258186
chr1 27869468 27869480 JDP2 JASPAR yes 27707374
chr1 27869468 27869480 JDP2 JASPAR yes 118258187
chr1 27869470 27869475 ATF1 TRANSFAC yes 27707375
chr1 27869470 27869475 ATF1 TRANSFAC yes 118258188
chr1 27869470 27869478 CREB1 JASPAR yes 27707376
chr1 27869470 27869478 GMEB2 JASPAR yes 27707377
chr1 27869470 27869478 CREB1 JASPAR yes 118258189
chr1 27869470 27869478 GMEB2 JASPAR yes 118258190
chr1 27869470 27869481 NFIL3 JASPAR yes 27707378
chr1 27869470 27869481 NFIL3 JASPAR yes 118258191
chr1 27869505 27869516 USF1 JASPAR yes 27707379
chr1 27869505 27869516 USF1 JASPAR yes 118258192
chr1 27869507 27869520 NR2F1 JASPAR yes 27707380
chr1 27869507 27869520 NR2F1 JASPAR yes 118258193
chr1 27869510 27869518 NR4A2 JASPAR yes 27707381
chr1 27869510 27869518 NR4A2 JASPAR yes 118258194
chr1 27869537 27869552 HNF4A JASPAR yes 27707382
chr1 27869537 27869552 HNF4A JASPAR yes 118258195
chr1 27869541 27869547 SOX10 JASPAR yes 27707383
chr1 27869541 27869547 SOX10 JASPAR yes 118258196
chr1 27869551 27869563 NHLH1 JASPAR yes 27707384
chr1 27869551 27869563 NHLH1 JASPAR yes 118258197
chr1 27869552 27869562 NHLH1 JASPAR yes 27707385
chr1 27869552 27869562 NHLH1 JASPAR yes 118258198
SNP sites on vista921[chr1:27869425-27869556]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27869543 rs553404113 C A
HNF4A SOX10
186779
Genes possibly regulated by vista921[chr1:27869425-27869556]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 47244
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 38614
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 7768
Expression level of Genes
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miRNAs possibly regulated by vista921[chr1:27869425-27869556]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results