EnhancerDB
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  3. vista922[chr1:27871123-27871471]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista922[chr1:27871123-27871471]
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Tissue distribution of vista922
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Transcription factor that possibly regulate vista922[chr1:27871123-27871471]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27871137 27871158 ZNF263 JASPAR yes 27707630
chr1 27871137 27871158 ZNF263 JASPAR yes 118258199
chr1 27871139 27871144 ETS2 TRANSFAC yes 27707631
chr1 27871139 27871144 ETS2 TRANSFAC yes 118258200
chr1 27871146 27871161 PRDM1 JASPAR yes 27707632
chr1 27871146 27871161 PRDM1 JASPAR yes 118258201
chr1 27871161 27871166 GATA1 TRANSFAC yes 27707633
chr1 27871161 27871166 GATA1 TRANSFAC yes 118258202
chr1 27871212 27871224 ZBTB7B JASPAR yes 27707634
chr1 27871212 27871224 ZBTB7C JASPAR yes 27707635
chr1 27871212 27871224 ZBTB7B JASPAR yes 118258203
chr1 27871212 27871224 ZBTB7C JASPAR yes 118258204
chr1 27871214 27871227 NFKB1 JASPAR yes 27707636
chr1 27871214 27871227 NFKB1 JASPAR yes 118258205
chr1 27871214 27871233 RFX2 JASPAR yes 27707637
chr1 27871214 27871233 RFX2 JASPAR yes 118258206
chr1 27871235 27871241 ESR1 TRANSFAC yes 27707638
chr1 27871235 27871241 ESR1 TRANSFAC yes 118258207
chr1 27871237 27871241 ESR1 TRANSFAC yes 27707639
chr1 27871237 27871241 ESR1 TRANSFAC yes 118258208
chr1 27871246 27871252 GATA3 JASPAR yes 27707640
chr1 27871246 27871252 GATA3 JASPAR yes 118258209
chr1 27871246 27871261 PRDM1 JASPAR yes 27707641
chr1 27871246 27871261 PRDM1 JASPAR yes 118258210
chr1 27871259 27871263 LFA1 TRANSFAC yes 27707642
chr1 27871259 27871263 LFA1 TRANSFAC yes 118258211
chr1 27871269 27871290 REST JASPAR yes 27707643
chr1 27871269 27871290 REST JASPAR yes 118258212
chr1 27871277 27871284 E2F1 TRANSFAC yes 27707644
chr1 27871277 27871284 E2F1 TRANSFAC yes 118258213
chr1 27871287 27871293 YY1 JASPAR yes 27707645
chr1 27871287 27871293 YY1 JASPAR yes 118258214
chr1 27871314 27871326 TAL1 JASPAR yes 27707646
chr1 27871314 27871326 TAL1 JASPAR yes 118258215
chr1 27871335 27871350 SOX21 JASPAR yes 27707647
chr1 27871335 27871350 SOX21 JASPAR yes 118258216
chr1 27871335 27871351 SOX4 JASPAR yes 27707648
chr1 27871335 27871351 SOX4 JASPAR yes 118258217
chr1 27871356 27871371 TFAP2A JASPAR yes 27707649
chr1 27871356 27871371 TFAP2C JASPAR yes 27707650
chr1 27871356 27871371 TFAP2A JASPAR yes 118258218
chr1 27871356 27871371 TFAP2C JASPAR yes 118258219
chr1 27871361 27871366 TFAP2A TRANSFAC yes 27707651
chr1 27871361 27871366 TFAP2A TRANSFAC yes 118258220
chr1 27871361 27871367 MZF1 JASPAR yes 27707652
chr1 27871361 27871367 MZF1 JASPAR yes 118258221
chr1 27871362 27871372 NFKB1 JASPAR yes 27707653
chr1 27871362 27871372 RELA JASPAR yes 27707654
chr1 27871362 27871372 REL JASPAR yes 27707655
chr1 27871362 27871372 NFKB1 JASPAR yes 118258222
chr1 27871362 27871372 RELA JASPAR yes 118258223
chr1 27871362 27871372 REL JASPAR yes 118258224
chr1 27871362 27871373 NFKB1 JASPAR yes 27707656
chr1 27871362 27871373 NFKB1 JASPAR yes 118258225
chr1 27871363 27871373 RELA JASPAR yes 27707657
chr1 27871363 27871373 RELA JASPAR yes 118258226
chr1 27871388 27871394 ZNF354C JASPAR yes 27707658
chr1 27871388 27871394 ZNF354C JASPAR yes 118258227
chr1 27871393 27871399 MZF1 JASPAR yes 27707659
chr1 27871393 27871399 MZF1 JASPAR yes 118258228
chr1 27871394 27871406 HES5 JASPAR yes 27707660
chr1 27871394 27871406 HES5 JASPAR yes 118258229
chr1 27871395 27871405 CLOCK JASPAR yes 27707661
chr1 27871395 27871405 HEY1 JASPAR yes 27707662
chr1 27871395 27871405 HEY2 JASPAR yes 27707663
chr1 27871395 27871405 MAX JASPAR yes 27707664
chr1 27871395 27871405 MNT JASPAR yes 27707665
chr1 27871395 27871405 CLOCK JASPAR yes 118258230
chr1 27871395 27871405 HEY1 JASPAR yes 118258231
chr1 27871395 27871405 HEY2 JASPAR yes 118258232
chr1 27871395 27871405 MAX JASPAR yes 118258233
chr1 27871395 27871405 MNT JASPAR yes 118258234
chr1 27871395 27871406 USF1 JASPAR yes 27707666
chr1 27871395 27871406 USF1 JASPAR yes 118258235
chr1 27871396 27871403 USF1 JASPAR yes 27707667
chr1 27871396 27871403 USF1 JASPAR yes 118258236
chr1 27871396 27871406 MAX JASPAR yes 27707668
chr1 27871396 27871406 MAX JASPAR yes 118258237
chr1 27871397 27871402 MYC TRANSFAC yes 27707669
chr1 27871397 27871402 USF1 TRANSFAC yes 27707670
chr1 27871397 27871402 USF2 TRANSFAC yes 27707671
chr1 27871397 27871402 MYC TRANSFAC yes 118258238
chr1 27871397 27871402 USF1 TRANSFAC yes 118258239
chr1 27871397 27871402 USF2 TRANSFAC yes 118258240
chr1 27871453 27871466 ATF4 JASPAR yes 27707672
chr1 27871453 27871466 ATF4 JASPAR yes 118258241
chr1 27871453 27871468 JUND JASPAR yes 27707673
chr1 27871453 27871468 JUND JASPAR yes 118258242
chr1 27871454 27871467 JUN JASPAR yes 27707674
chr1 27871454 27871467 JUN JASPAR yes 118258243
SNP sites on vista922[chr1:27871123-27871471]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27871201 rs538246585 C T no 186788
chr1 27871254 rs78389838 G C
PRDM1
186789
chr1 27871260 rs76479191 G A
LFA1 PRDM1
186790
chr1 27871315 rs556179976 T C
TAL1
186791
chr1 27871328 rs114160111 C T no 186792
chr1 27871402 rs182574240 T C
CLOCK HES5 HEY1 HEY2 MAX MNT MYC USF1 USF2
186793
Genes possibly regulated by vista922[chr1:27871123-27871471]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 45546
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 40529
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 9683
Expression level of Genes
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miRNAs possibly regulated by vista922[chr1:27871123-27871471]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results