EnhancerDB
  1. Home
  2. SNP
  3. rs78389838[chr1:27871254]
Enhancers that have rs78389838[chr1:27871254]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
chr1 27871123 27871471 vista922
VISTA
Transcript factors that have rs78389838[chr1:27871254]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27871246 27871261 PRDM1 JASPAR yes 27707641
chr1 27871246 27871261 PRDM1 JASPAR yes 118258210
Genes associated with rs78389838[chr1:27871254], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More