EnhancerDB
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  3. vista927[chr1:27893697-27893957]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista927[chr1:27893697-27893957]
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Tissue distribution of vista927
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Transcription factor that possibly regulate vista927[chr1:27893697-27893957]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27893686 27893706 TP63 JASPAR yes 27710069
chr1 27893686 27893706 TP63 JASPAR yes 118258520
chr1 27893687 27893705 TP53 JASPAR yes 27710070
chr1 27893687 27893705 TP63 JASPAR yes 27710071
chr1 27893687 27893705 TP73 JASPAR yes 27710072
chr1 27893687 27893705 TP53 JASPAR yes 118258521
chr1 27893687 27893705 TP63 JASPAR yes 118258522
chr1 27893687 27893705 TP73 JASPAR yes 118258523
chr1 27893689 27893704 TP53 JASPAR yes 27710073
chr1 27893689 27893704 TP53 JASPAR yes 118258524
chr1 27893716 27893727 STAT3 JASPAR yes 27710074
chr1 27893716 27893727 STAT3 JASPAR yes 118258525
chr1 27893721 27893726 ETS2 TRANSFAC yes 27710075
chr1 27893721 27893726 ETS2 TRANSFAC yes 118258526
chr1 27893759 27893762 MYB TRANSFAC yes 27710076
chr1 27893759 27893762 MYB TRANSFAC yes 118258527
chr1 27893784 27893803 RFX2 JASPAR yes 27710077
chr1 27893784 27893803 RFX2 JASPAR yes 118258528
chr1 27893786 27893801 RFX5 JASPAR yes 27710078
chr1 27893786 27893801 RFX5 JASPAR yes 118258529
chr1 27893787 27893792 MYC TRANSFAC yes 27710079
chr1 27893787 27893792 MYC TRANSFAC yes 118258530
chr1 27893788 27893804 RFX2 JASPAR yes 27710080
chr1 27893788 27893804 RFX3 JASPAR yes 27710081
chr1 27893788 27893804 RFX4 JASPAR yes 27710082
chr1 27893788 27893804 RFX5 JASPAR yes 27710083
chr1 27893788 27893804 RFX2 JASPAR yes 118258531
chr1 27893788 27893804 RFX3 JASPAR yes 118258532
chr1 27893788 27893804 RFX4 JASPAR yes 118258533
chr1 27893788 27893804 RFX5 JASPAR yes 118258534
chr1 27893789 27893798 NFIX JASPAR yes 27710084
chr1 27893789 27893798 NFIX JASPAR yes 118258535
chr1 27893789 27893808 RFX2 JASPAR yes 27710085
chr1 27893789 27893808 RFX2 JASPAR yes 118258536
chr1 27893791 27893797 NFIC JASPAR yes 27710086
chr1 27893791 27893797 NFIC JASPAR yes 118258537
chr1 27893803 27893808 SP1 TRANSFAC yes 27710087
chr1 27893803 27893808 SP1 TRANSFAC yes 118258538
chr1 27893804 27893819 HNF4G JASPAR yes 27710088
chr1 27893804 27893819 NR2C2 JASPAR yes 27710089
chr1 27893804 27893819 HNF4G JASPAR yes 118258539
chr1 27893804 27893819 NR2C2 JASPAR yes 118258540
chr1 27893805 27893811 ESR1 TRANSFAC yes 27710090
chr1 27893805 27893811 ESR1 TRANSFAC yes 118258541
chr1 27893805 27893819 RXRB JASPAR yes 27710091
chr1 27893805 27893819 RXRG JASPAR yes 27710092
chr1 27893805 27893819 RXRB JASPAR yes 118258542
chr1 27893805 27893819 RXRG JASPAR yes 118258543
chr1 27893805 27893820 HNF4A JASPAR yes 27710093
chr1 27893805 27893820 HNF4A JASPAR yes 118258544
chr1 27893807 27893811 ESR1 TRANSFAC yes 27710094
chr1 27893807 27893811 ESR1 TRANSFAC yes 118258545
chr1 27893814 27893818 LFA1 TRANSFAC yes 27710095
chr1 27893814 27893818 LFA1 TRANSFAC yes 118258546
chr1 27893825 27893836 NRF1 JASPAR yes 27710096
chr1 27893825 27893836 NRF1 JASPAR yes 118258547
chr1 27893851 27893855 H1TF2 TRANSFAC yes 27710097
chr1 27893851 27893855 NFE TRANSFAC yes 27710098
chr1 27893851 27893855 SRF TRANSFAC yes 27710099
chr1 27893851 27893855 H1TF2 TRANSFAC yes 118258548
chr1 27893851 27893855 NFE TRANSFAC yes 118258549
chr1 27893851 27893855 SRF TRANSFAC yes 118258550
chr1 27893854 27893863 SRY JASPAR yes 27710100
chr1 27893854 27893863 SRY JASPAR yes 118258551
chr1 27893866 27893880 FOXF2 JASPAR yes 27710101
chr1 27893866 27893880 FOXF2 JASPAR yes 118258552
chr1 27893866 27893881 FOXP1 JASPAR yes 27710102
chr1 27893866 27893881 FOXP1 JASPAR yes 118258553
chr1 27893867 27893878 FOXA1 JASPAR yes 27710103
chr1 27893867 27893878 FOXH1 JASPAR yes 27710104
chr1 27893867 27893878 FOXA1 JASPAR yes 118258554
chr1 27893867 27893878 FOXH1 JASPAR yes 118258555
chr1 27893867 27893882 FOXA1 JASPAR yes 27710105
chr1 27893867 27893882 FOXA1 JASPAR yes 118258556
chr1 27893869 27893880 FOXP2 JASPAR yes 27710106
chr1 27893869 27893880 FOXP2 JASPAR yes 118258557
chr1 27893874 27893884 TFAP4 JASPAR yes 27710107
chr1 27893874 27893884 TFAP4 JASPAR yes 118258558
chr1 27893884 27893898 PLAG1 JASPAR yes 27710108
chr1 27893884 27893898 PLAG1 JASPAR yes 118258559
chr1 27893895 27893900 SP1 TRANSFAC yes 27710109
chr1 27893895 27893900 SP1 TRANSFAC yes 118258560
chr1 27893895 27893902 SP1 TRANSFAC yes 27710110
chr1 27893895 27893902 SP1 TRANSFAC yes 118258561
chr1 27893895 27893909 PLAG1 JASPAR yes 27710111
chr1 27893895 27893909 PLAG1 JASPAR yes 118258562
chr1 27893901 27893907 MAZ TRANSFAC yes 27710112
chr1 27893901 27893907 MAZ TRANSFAC yes 118258563
chr1 27893901 27893911 SP1 JASPAR yes 27710113
chr1 27893901 27893911 SP1 JASPAR yes 118258564
chr1 27893905 27893920 NR2C2 JASPAR yes 27710114
chr1 27893905 27893920 NR2C2 JASPAR yes 118258565
chr1 27893906 27893921 RUNX2 JASPAR yes 27710115
chr1 27893906 27893921 RUNX2 JASPAR yes 118258566
chr1 27893955 27893963 HOXA5 JASPAR yes 27710116
chr1 27893955 27893963 HOXA5 JASPAR yes 118258567
chr1 27893957 27893965 BARX1 JASPAR yes 27710117
chr1 27893957 27893965 BARX1 JASPAR yes 118258568
SNP sites on vista927[chr1:27893697-27893957]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27893804 rs532174168 G A
HNF4G NR2C2 RFX2 RFX3 RFX4 RFX5 SP1
186972
chr1 27893829 rs535547562 G A,T
NRF1
186973
chr1 27893894 rs568111863 G A
PLAG1
186974
Genes possibly regulated by vista927[chr1:27893697-27893957]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 22972
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 63015
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 32169
Expression level of Genes
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miRNAs possibly regulated by vista927[chr1:27893697-27893957]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results