EnhancerDB
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  3. rs532174168[chr1:27893804]
Enhancers that have rs532174168[chr1:27893804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27893697 27893957 vista927
VISTA
Transcript factors that have rs532174168[chr1:27893804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27893788 27893804 RFX2 JASPAR yes 27710080
chr1 27893788 27893804 RFX3 JASPAR yes 27710081
chr1 27893788 27893804 RFX4 JASPAR yes 27710082
chr1 27893788 27893804 RFX5 JASPAR yes 27710083
chr1 27893788 27893804 RFX2 JASPAR yes 118258531
chr1 27893788 27893804 RFX3 JASPAR yes 118258532
chr1 27893788 27893804 RFX4 JASPAR yes 118258533
chr1 27893788 27893804 RFX5 JASPAR yes 118258534
chr1 27893789 27893808 RFX2 JASPAR yes 27710085
chr1 27893789 27893808 RFX2 JASPAR yes 118258536
chr1 27893803 27893808 SP1 TRANSFAC yes 27710087
chr1 27893803 27893808 SP1 TRANSFAC yes 118258538
chr1 27893804 27893819 HNF4G JASPAR yes 27710088
chr1 27893804 27893819 NR2C2 JASPAR yes 27710089
chr1 27893804 27893819 HNF4G JASPAR yes 118258539
chr1 27893804 27893819 NR2C2 JASPAR yes 118258540
Genes associated with rs532174168[chr1:27893804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More