EnhancerDB
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  3. vista930[chr1:27907931-27908052]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista930[chr1:27907931-27908052]
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Tissue distribution of vista930
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Transcription factor that possibly regulate vista930[chr1:27907931-27908052]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27907920 27907932 YY1 JASPAR yes 27711948
chr1 27907920 27907932 YY1 JASPAR yes 118258678
chr1 27907926 27907936 HMBOX1 JASPAR yes 27711949
chr1 27907926 27907936 HMBOX1 JASPAR yes 118258679
chr1 27907928 27907931 MYB TRANSFAC yes 27711950
chr1 27907928 27907931 MYB TRANSFAC yes 118258680
chr1 27907932 27907947 FOXP1 JASPAR yes 27711951
chr1 27907932 27907947 FOXP1 JASPAR yes 118258681
chr1 27907932 27907953 IRF1 JASPAR yes 27711952
chr1 27907932 27907953 IRF1 JASPAR yes 118258682
chr1 27907933 27907948 FOXP1 JASPAR yes 27711953
chr1 27907933 27907948 FOXP1 JASPAR yes 118258683
chr1 27907934 27907949 FOXP1 JASPAR yes 27711954
chr1 27907934 27907949 FOXP1 JASPAR yes 118258684
chr1 27907935 27907950 FOXP1 JASPAR yes 27711955
chr1 27907935 27907950 FOXP1 JASPAR yes 118258685
chr1 27907936 27907951 FOXP1 JASPAR yes 27711956
chr1 27907936 27907951 FOXP1 JASPAR yes 118258686
chr1 27907936 27907957 IRF1 JASPAR yes 27711957
chr1 27907936 27907957 IRF1 JASPAR yes 118258687
chr1 27907937 27907952 FOXP1 JASPAR yes 27711958
chr1 27907937 27907952 FOXP1 JASPAR yes 118258688
chr1 27907938 27907953 FOXP1 JASPAR yes 27711959
chr1 27907938 27907953 FOXP1 JASPAR yes 118258689
chr1 27907989 27908000 TBX20 JASPAR yes 27711960
chr1 27907989 27908000 TBX2 JASPAR yes 27711961
chr1 27907989 27908000 TBX20 JASPAR yes 118258690
chr1 27907989 27908000 TBX2 JASPAR yes 118258691
chr1 27907990 27907998 TBX5 JASPAR yes 27711962
chr1 27907990 27907998 TBX5 JASPAR yes 118258692
chr1 27907994 27908005 CDX2 JASPAR yes 27711963
chr1 27907994 27908005 CDX2 JASPAR yes 118258693
chr1 27907995 27908006 HOXA10 JASPAR yes 27711964
chr1 27907995 27908006 HOXA10 JASPAR yes 118258694
chr1 27907996 27908005 CDX1 JASPAR yes 27711965
chr1 27907996 27908005 CDX1 JASPAR yes 118258695
chr1 27908022 27908031 THAP1 JASPAR yes 27711966
chr1 27908022 27908031 THAP1 JASPAR yes 118258696
chr1 27908025 27908029 LFA1 TRANSFAC yes 27711967
chr1 27908025 27908029 LFA1 TRANSFAC yes 118258697
chr1 27908026 27908047 REST JASPAR yes 27711968
chr1 27908026 27908047 REST JASPAR yes 118258698
chr1 27908027 27908046 REST JASPAR yes 27711969
chr1 27908027 27908046 REST JASPAR yes 118258699
chr1 27908028 27908043 HNF4A JASPAR yes 27711970
chr1 27908028 27908043 HNF4A JASPAR yes 118258700
chr1 27908048 27908061 NFKB1 JASPAR yes 27711971
chr1 27908048 27908061 NFKB1 JASPAR yes 118258701
SNP sites on vista930[chr1:27907931-27908052]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27907988 rs57531237 T C no 187114
chr1 27907992 rs575432365 G A
TBX2 TBX20 TBX5
187115
chr1 27908031 rs114162611 G A
HNF4A REST THAP1
187116
Genes possibly regulated by vista930[chr1:27907931-27908052]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27730730 27816669 - WASF2 ENSG00000158195.6 27816669 0.61 1.0 392 8738
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 77110
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 46264
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 9323
Expression level of Genes
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miRNAs possibly regulated by vista930[chr1:27907931-27908052]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results