EnhancerDB
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  3. rs575432365[chr1:27907992]
Enhancers that have rs575432365[chr1:27907992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27907931 27908052 vista930
VISTA
Transcript factors that have rs575432365[chr1:27907992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27907989 27908000 TBX20 JASPAR yes 27711960
chr1 27907989 27908000 TBX2 JASPAR yes 27711961
chr1 27907989 27908000 TBX20 JASPAR yes 118258690
chr1 27907989 27908000 TBX2 JASPAR yes 118258691
chr1 27907990 27907998 TBX5 JASPAR yes 27711962
chr1 27907990 27907998 TBX5 JASPAR yes 118258692
Genes associated with rs575432365[chr1:27907992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More