EnhancerDB
  1. Home
  2. Enhancers
  3. vista944[chr1:27973679-27973995]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista944[chr1:27973679-27973995]
Back to top
Tissue distribution of vista944
Back to top
Transcription factor that possibly regulate vista944[chr1:27973679-27973995]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27973670 27973690 ESR1 JASPAR yes 27717819
chr1 27973670 27973690 ESR1 JASPAR yes 118259833
chr1 27973683 27973689 NFIC JASPAR yes 27717820
chr1 27973683 27973689 NFIC JASPAR yes 118259834
chr1 27973684 27973696 BHLHE23 JASPAR yes 27717821
chr1 27973684 27973696 BHLHE23 JASPAR yes 118259835
chr1 27973685 27973695 BHLHE22 JASPAR yes 27717822
chr1 27973685 27973695 NEUROD2 JASPAR yes 27717823
chr1 27973685 27973695 NEUROG2 JASPAR yes 27717824
chr1 27973685 27973695 OLIG1 JASPAR yes 27717825
chr1 27973685 27973695 OLIG2 JASPAR yes 27717826
chr1 27973685 27973695 OLIG3 JASPAR yes 27717827
chr1 27973685 27973695 BHLHE22 JASPAR yes 118259836
chr1 27973685 27973695 NEUROD2 JASPAR yes 118259837
chr1 27973685 27973695 NEUROG2 JASPAR yes 118259838
chr1 27973685 27973695 OLIG1 JASPAR yes 118259839
chr1 27973685 27973695 OLIG2 JASPAR yes 118259840
chr1 27973685 27973695 OLIG3 JASPAR yes 118259841
chr1 27973688 27973703 TP53 JASPAR yes 27717828
chr1 27973688 27973703 TP53 JASPAR yes 118259842
chr1 27973714 27973735 ZNF263 JASPAR yes 27717829
chr1 27973714 27973735 ZNF263 JASPAR yes 118259843
chr1 27973717 27973738 ZNF263 JASPAR yes 27717830
chr1 27973717 27973738 ZNF263 JASPAR yes 118259844
chr1 27973722 27973743 ZNF263 JASPAR yes 27717831
chr1 27973722 27973743 ZNF263 JASPAR yes 118259845
chr1 27973723 27973744 ZNF263 JASPAR yes 27717832
chr1 27973723 27973744 ZNF263 JASPAR yes 118259846
chr1 27973726 27973747 ZNF263 JASPAR yes 27717833
chr1 27973726 27973747 ZNF263 JASPAR yes 118259847
chr1 27973727 27973732 ETS2 TRANSFAC yes 27717834
chr1 27973727 27973732 ETS2 TRANSFAC yes 118259848
chr1 27973727 27973735 EHF JASPAR yes 27717835
chr1 27973727 27973735 EHF JASPAR yes 118259849
chr1 27973734 27973748 STAT1 JASPAR yes 27717836
chr1 27973734 27973748 STAT1 JASPAR yes 118259850
chr1 27973738 27973743 ETS2 TRANSFAC yes 27717837
chr1 27973738 27973743 ETS2 TRANSFAC yes 118259851
chr1 27973746 27973755 NKX3-2 JASPAR yes 27717838
chr1 27973746 27973755 NKX3-2 JASPAR yes 118259852
chr1 27973747 27973760 SCRT2 JASPAR yes 27717839
chr1 27973747 27973760 SCRT2 JASPAR yes 118259853
chr1 27973773 27973783 ETS1 JASPAR yes 27717840
chr1 27973773 27973783 ETS1 JASPAR yes 118259854
chr1 27973773 27973784 ETV2 JASPAR yes 27717841
chr1 27973773 27973784 ETV2 JASPAR yes 118259855
chr1 27973775 27973780 GATA2 JASPAR yes 27717842
chr1 27973775 27973780 GATA2 JASPAR yes 118259856
chr1 27973779 27973783 NFE TRANSFAC yes 27717843
chr1 27973779 27973783 NFE TRANSFAC yes 118259857
chr1 27973780 27973790 SMAD3 JASPAR yes 27717844
chr1 27973780 27973790 SMAD3 JASPAR yes 118259858
chr1 27973787 27973798 FOXB1 JASPAR yes 27717845
chr1 27973787 27973798 FOXB1 JASPAR yes 118259859
chr1 27973788 27973792 YY1 TRANSFAC yes 27717846
chr1 27973788 27973792 YY1 TRANSFAC yes 118259860
chr1 27973829 27973850 IRF1 JASPAR yes 27717847
chr1 27973829 27973850 IRF1 JASPAR yes 118259861
chr1 27973831 27973846 IRF9 JASPAR yes 27717848
chr1 27973831 27973846 IRF9 JASPAR yes 118259862
chr1 27973832 27973846 IRF8 JASPAR yes 27717849
chr1 27973832 27973846 IRF8 JASPAR yes 118259863
chr1 27973833 27973838 GATA2 JASPAR yes 27717850
chr1 27973833 27973838 GATA2 JASPAR yes 118259864
chr1 27973833 27973847 STAT1 JASPAR yes 27717851
chr1 27973833 27973847 STAT1 JASPAR yes 118259865
chr1 27973833 27973848 PRDM1 JASPAR yes 27717852
chr1 27973833 27973848 STAT2 JASPAR yes 27717853
chr1 27973833 27973848 PRDM1 JASPAR yes 118259866
chr1 27973833 27973848 STAT2 JASPAR yes 118259867
chr1 27973833 27973851 IRF2 JASPAR yes 27717854
chr1 27973833 27973851 IRF2 JASPAR yes 118259868
chr1 27973900 27973912 NHLH1 JASPAR yes 27717855
chr1 27973900 27973912 NHLH1 JASPAR yes 118259869
chr1 27973900 27973913 ZBTB18 JASPAR yes 27717856
chr1 27973900 27973913 ZBTB18 JASPAR yes 118259870
chr1 27973901 27973911 MSC JASPAR yes 27717857
chr1 27973901 27973911 TFAP4 JASPAR yes 27717858
chr1 27973901 27973911 MSC JASPAR yes 118259871
chr1 27973901 27973911 TFAP4 JASPAR yes 118259872
chr1 27973925 27973929 NFE TRANSFAC yes 27717859
chr1 27973925 27973929 NFE TRANSFAC yes 118259873
chr1 27973931 27973942 BATF JASPAR yes 27717860
chr1 27973931 27973942 BATF JASPAR yes 118259874
chr1 27973939 27973942 MYB TRANSFAC yes 27717861
chr1 27973939 27973942 MYB TRANSFAC yes 118259875
chr1 27973947 27973964 RXRA JASPAR yes 27717862
chr1 27973947 27973964 RXRA JASPAR yes 118259876
chr1 27973958 27973961 MYB TRANSFAC yes 27717863
chr1 27973958 27973961 MYB TRANSFAC yes 118259877
chr1 27973991 27974010 CTCF JASPAR yes 27717864
chr1 27973991 27974010 CTCF JASPAR yes 118259878
SNP sites on vista944[chr1:27973679-27973995]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27973748 rs1292076 C A,G
NKX3-2 SCRT2 STAT1
187693
chr1 27973982 rs74824932 C A no 187694
Genes possibly regulated by vista944[chr1:27973679-27973995]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 57263
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 88109
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 75266
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 21505
Expression level of Genes
Back to top
miRNAs possibly regulated by vista944[chr1:27973679-27973995]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results