EnhancerDB
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  3. rs1292076[chr1:27973748]
Enhancers that have rs1292076[chr1:27973748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27973679 27973995 vista944
VISTA
Transcript factors that have rs1292076[chr1:27973748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27973564 27974823 ZNF143 GTRD no Epithelial (MCF-7) 107802609
chr1 27973734 27973748 STAT1 JASPAR yes 27717836
chr1 27973734 27973748 STAT1 JASPAR yes 118259850
chr1 27973746 27973755 NKX3-2 JASPAR yes 27717838
chr1 27973746 27973755 NKX3-2 JASPAR yes 118259852
chr1 27973747 27973760 SCRT2 JASPAR yes 27717839
chr1 27973747 27973760 SCRT2 JASPAR yes 118259853
Genes associated with rs1292076[chr1:27973748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More