EnhancerDB
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  3. vista946[chr1:27979244-27979520]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista946[chr1:27979244-27979520]
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Tissue distribution of vista946
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Transcription factor that possibly regulate vista946[chr1:27979244-27979520]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27979233 27979254 ZNF263 JASPAR yes 27718700
chr1 27979233 27979254 ZNF263 JASPAR yes 118259990
chr1 27979235 27979256 ZNF263 JASPAR yes 27718701
chr1 27979235 27979256 ZNF263 JASPAR yes 118259991
chr1 27979243 27979264 IRF1 JASPAR yes 27718702
chr1 27979243 27979264 IRF1 JASPAR yes 118259992
chr1 27979247 27979261 SPI1 JASPAR yes 27718703
chr1 27979247 27979261 STAT1 JASPAR yes 27718704
chr1 27979247 27979261 SPI1 JASPAR yes 118259993
chr1 27979247 27979261 STAT1 JASPAR yes 118259994
chr1 27979247 27979262 STAT2 JASPAR yes 27718705
chr1 27979247 27979262 STAT2 JASPAR yes 118259995
chr1 27979261 27979275 SPI1 JASPAR yes 27718706
chr1 27979261 27979275 SPI1 JASPAR yes 118259996
chr1 27979267 27979283 POU4F3 JASPAR yes 27718707
chr1 27979267 27979283 POU4F3 JASPAR yes 118259997
chr1 27979269 27979283 POU4F1 JASPAR yes 27718708
chr1 27979269 27979283 POU4F1 JASPAR yes 118259998
chr1 27979273 27979277 TEAD2 TRANSFAC yes 27718709
chr1 27979273 27979277 TEAD2 TRANSFAC yes 118259999
chr1 27979273 27979289 SOX4 JASPAR yes 27718710
chr1 27979273 27979289 SOX4 JASPAR yes 118260000
chr1 27979283 27979298 STAT1 JASPAR yes 27718711
chr1 27979283 27979298 STAT1 JASPAR yes 118260001
chr1 27979285 27979296 STAT1 JASPAR yes 27718712
chr1 27979285 27979296 STAT3 JASPAR yes 27718713
chr1 27979285 27979296 STAT1 JASPAR yes 118260002
chr1 27979285 27979296 STAT3 JASPAR yes 118260003
chr1 27979296 27979305 PITX3 JASPAR yes 27718714
chr1 27979296 27979305 PITX3 JASPAR yes 118260004
chr1 27979297 27979305 RHOXF1 JASPAR yes 27718715
chr1 27979297 27979305 RHOXF1 JASPAR yes 118260005
chr1 27979313 27979317 TEAD2 TRANSFAC yes 27718716
chr1 27979313 27979317 TEAD2 TRANSFAC yes 118260006
chr1 27979315 27979318 MYB TRANSFAC yes 27718717
chr1 27979315 27979318 MYB TRANSFAC yes 118260007
chr1 27979323 27979335 PBX1 JASPAR yes 27718718
chr1 27979323 27979335 PBX1 JASPAR yes 118260008
chr1 27979326 27979330 H1TF2 TRANSFAC yes 27718719
chr1 27979326 27979330 NFE TRANSFAC yes 27718720
chr1 27979326 27979330 SRF TRANSFAC yes 27718721
chr1 27979326 27979330 H1TF2 TRANSFAC yes 118260009
chr1 27979326 27979330 NFE TRANSFAC yes 118260010
chr1 27979326 27979330 SRF TRANSFAC yes 118260011
chr1 27979344 27979361 RARA JASPAR yes 27718722
chr1 27979344 27979361 RXRA JASPAR yes 27718723
chr1 27979344 27979361 RARA JASPAR yes 118260012
chr1 27979344 27979361 RXRA JASPAR yes 118260013
chr1 27979352 27979370 RARA JASPAR yes 27718724
chr1 27979352 27979370 RARA JASPAR yes 118260014
chr1 27979357 27979369 FOXI1 JASPAR yes 27718725
chr1 27979357 27979369 FOXI1 JASPAR yes 118260015
chr1 27979364 27979383 REST JASPAR yes 27718726
chr1 27979364 27979383 REST JASPAR yes 118260016
chr1 27979397 27979409 INSM1 JASPAR yes 27718727
chr1 27979397 27979409 INSM1 JASPAR yes 118260017
chr1 27979410 27979421 STAT3 JASPAR yes 27718728
chr1 27979410 27979421 STAT3 JASPAR yes 118260018
chr1 27979415 27979427 NHLH1 JASPAR yes 27718729
chr1 27979415 27979427 NHLH1 JASPAR yes 118260019
chr1 27979416 27979426 ID4 JASPAR yes 27718730
chr1 27979416 27979426 NHLH1 JASPAR yes 27718731
chr1 27979416 27979426 TCF3 JASPAR yes 27718732
chr1 27979416 27979426 TCF4 JASPAR yes 27718733
chr1 27979416 27979426 ID4 JASPAR yes 118260020
chr1 27979416 27979426 NHLH1 JASPAR yes 118260021
chr1 27979416 27979426 TCF3 JASPAR yes 118260022
chr1 27979416 27979426 TCF4 JASPAR yes 118260023
chr1 27979417 27979426 SNAI2 JASPAR yes 27718734
chr1 27979417 27979426 SNAI2 JASPAR yes 118260024
chr1 27979418 27979423 USF2 TRANSFAC yes 27718735
chr1 27979418 27979423 USF2 TRANSFAC yes 118260025
chr1 27979426 27979434 E2F1 JASPAR yes 27718736
chr1 27979426 27979434 E2F1 JASPAR yes 118260026
chr1 27979482 27979486 YY1 TRANSFAC yes 27718737
chr1 27979482 27979486 YY1 TRANSFAC yes 118260027
chr1 27979515 27979529 PAX6 JASPAR yes 27718738
chr1 27979515 27979529 PAX6 JASPAR yes 118260028
SNP sites on vista946[chr1:27979244-27979520]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27979272 rs78036732 T G
POU4F1 POU4F3 SPI1
187760
chr1 27979432 rs6688240 C T
E2F1
187761
chr1 27979436 rs539463246 G A no 187762
chr1 27979440 rs6703315 T C no 187763
chr1 27979460 rs78578543 T C no 187764
Genes possibly regulated by vista946[chr1:27979244-27979520]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 51698
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 82544
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 80791
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 27030
Expression level of Genes
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miRNAs possibly regulated by vista946[chr1:27979244-27979520]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results