EnhancerDB
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  3. rs78578543[chr1:27979460]
Enhancers that have rs78578543[chr1:27979460]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27979244 27979520 vista946
VISTA
Transcript factors that have rs78578543[chr1:27979460]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27978300 27980434 ZNF274 GTRD no Cervix (HeLa-S3) 107802611
Genes associated with rs78578543[chr1:27979460], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 27276053 27286897 - C1orf172 ENSG00000175707.7 27286897 692563 Liver 0.467339 381