EnhancerDB
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  3. vista948[chr1:27985480-27985709]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista948[chr1:27985480-27985709]
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Tissue distribution of vista948
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Transcription factor that possibly regulate vista948[chr1:27985480-27985709]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27985485 27985500 RUNX2 JASPAR yes 27719677
chr1 27985485 27985500 RUNX2 JASPAR yes 118260059
chr1 27985485 27985502 ZNF410 JASPAR yes 27719678
chr1 27985485 27985502 ZNF410 JASPAR yes 118260060
chr1 27985505 27985514 NFIX JASPAR yes 27719679
chr1 27985505 27985514 NFIX JASPAR yes 118260061
chr1 27985505 27985515 NFIA JASPAR yes 27719680
chr1 27985505 27985515 NFIA JASPAR yes 118260062
chr1 27985507 27985513 NFIC JASPAR yes 27719681
chr1 27985507 27985513 NFIC JASPAR yes 118260063
chr1 27985512 27985527 TFAP2A JASPAR yes 27719682
chr1 27985512 27985527 TFAP2C JASPAR yes 27719683
chr1 27985512 27985527 TFAP2A JASPAR yes 118260064
chr1 27985512 27985527 TFAP2C JASPAR yes 118260065
chr1 27985513 27985523 SREBF1 JASPAR yes 27719684
chr1 27985513 27985523 SREBF1 JASPAR yes 118260066
chr1 27985514 27985529 TFAP2A JASPAR yes 27719685
chr1 27985514 27985529 TFAP2C JASPAR yes 27719686
chr1 27985514 27985529 TFAP2A JASPAR yes 118260067
chr1 27985514 27985529 TFAP2C JASPAR yes 118260068
chr1 27985555 27985569 JUN JASPAR yes 27719687
chr1 27985555 27985569 JUN JASPAR yes 118260069
chr1 27985558 27985569 JUNB JASPAR yes 27719688
chr1 27985558 27985569 JUNB JASPAR yes 118260070
chr1 27985559 27985570 FOSL1 JASPAR yes 27719689
chr1 27985559 27985570 FOSL1 JASPAR yes 118260071
chr1 27985560 27985567 JUN TRANSFAC yes 27719690
chr1 27985560 27985567 JUN TRANSFAC yes 118260072
chr1 27985560 27985571 FOSL2 JASPAR yes 27719691
chr1 27985560 27985571 FOSL2 JASPAR yes 118260073
chr1 27985561 27985572 BATF JASPAR yes 27719692
chr1 27985561 27985572 BATF JASPAR yes 118260074
chr1 27985585 27985593 EHF JASPAR yes 27719693
chr1 27985585 27985593 EHF JASPAR yes 118260075
chr1 27985591 27985611 TP53 JASPAR yes 27719694
chr1 27985591 27985611 TP53 JASPAR yes 118260076
chr1 27985603 27985621 SRF JASPAR yes 27719695
chr1 27985603 27985621 SRF JASPAR yes 118260077
chr1 27985613 27985628 MAFK JASPAR yes 27719696
chr1 27985613 27985628 MAFK JASPAR yes 118260078
chr1 27985637 27985652 TFAP2A JASPAR yes 27719697
chr1 27985637 27985652 TFAP2A JASPAR yes 118260079
chr1 27985640 27985654 EBF1 JASPAR yes 27719698
chr1 27985640 27985654 EBF1 JASPAR yes 118260080
chr1 27985642 27985653 EBF1 JASPAR yes 27719699
chr1 27985642 27985653 EBF1 JASPAR yes 118260081
chr1 27985646 27985651 TFAP2A TRANSFAC yes 27719700
chr1 27985646 27985651 TFAP2A TRANSFAC yes 118260082
chr1 27985646 27985652 MZF1 JASPAR yes 27719701
chr1 27985646 27985652 MZF1 JASPAR yes 118260083
chr1 27985654 27985666 YY1 JASPAR yes 27719702
chr1 27985654 27985666 YY1 JASPAR yes 118260084
chr1 27985657 27985663 YY1 JASPAR yes 27719703
chr1 27985657 27985663 YY1 JASPAR yes 118260085
chr1 27985683 27985689 YY1 JASPAR yes 27719704
chr1 27985683 27985689 YY1 JASPAR yes 118260086
SNP sites on vista948[chr1:27985480-27985709]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27985648 rs577623997 G T
EBF1 MZF1 TFAP2A
187864
Genes possibly regulated by vista948[chr1:27985480-27985709]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 45462
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 76308
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 86980
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 33219
Expression level of Genes
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miRNAs possibly regulated by vista948[chr1:27985480-27985709]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results