EnhancerDB
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  3. rs577623997[chr1:27985648]
Enhancers that have rs577623997[chr1:27985648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27985480 27985709 vista948
VISTA
Transcript factors that have rs577623997[chr1:27985648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802613
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802614
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802615
chr1 27985637 27985652 TFAP2A JASPAR yes 27719697
chr1 27985637 27985652 TFAP2A JASPAR yes 118260079
chr1 27985640 27985654 EBF1 JASPAR yes 27719698
chr1 27985640 27985654 EBF1 JASPAR yes 118260080
chr1 27985642 27985653 EBF1 JASPAR yes 27719699
chr1 27985642 27985653 EBF1 JASPAR yes 118260081
chr1 27985646 27985651 TFAP2A TRANSFAC yes 27719700
chr1 27985646 27985651 TFAP2A TRANSFAC yes 118260082
chr1 27985646 27985652 MZF1 JASPAR yes 27719701
chr1 27985646 27985652 MZF1 JASPAR yes 118260083
Genes associated with rs577623997[chr1:27985648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More