EnhancerDB
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  3. vista950[chr1:27986111-27986384]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista950[chr1:27986111-27986384]
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Tissue distribution of vista950
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Transcription factor that possibly regulate vista950[chr1:27986111-27986384]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 27986133 27986143 RORA JASPAR yes 27719748
chr1 27986133 27986143 RORA JASPAR yes 118260097
chr1 27986136 27986142 ESR1 TRANSFAC yes 27719749
chr1 27986136 27986142 ESR1 TRANSFAC yes 118260098
chr1 27986137 27986152 ESR2 JASPAR yes 27719750
chr1 27986137 27986152 ESR2 JASPAR yes 118260099
chr1 27986137 27986154 RARA JASPAR yes 27719751
chr1 27986137 27986154 RXRA JASPAR yes 27719752
chr1 27986137 27986154 RARA JASPAR yes 118260100
chr1 27986137 27986154 RXRA JASPAR yes 118260101
chr1 27986138 27986142 ESR1 TRANSFAC yes 27719753
chr1 27986138 27986142 ESR1 TRANSFAC yes 118260102
chr1 27986184 27986191 E2F1 TRANSFAC yes 27719754
chr1 27986184 27986191 E2F1 TRANSFAC yes 118260103
chr1 27986184 27986192 E2F1 JASPAR yes 27719755
chr1 27986184 27986192 E2F1 JASPAR yes 118260104
chr1 27986202 27986222 RREB1 JASPAR yes 27719756
chr1 27986202 27986222 RREB1 JASPAR yes 118260105
chr1 27986205 27986225 RREB1 JASPAR yes 27719757
chr1 27986205 27986225 RREB1 JASPAR yes 118260106
chr1 27986218 27986223 SP1 TRANSFAC yes 27719758
chr1 27986218 27986223 SP1 TRANSFAC yes 118260107
chr1 27986220 27986225 TFAP2A TRANSFAC yes 27719759
chr1 27986220 27986225 TFAP2A TRANSFAC yes 118260108
chr1 27986220 27986226 MZF1 JASPAR yes 27719760
chr1 27986220 27986226 MZF1 JASPAR yes 118260109
chr1 27986222 27986227 ETS2 TRANSFAC yes 27719761
chr1 27986222 27986227 ETS2 TRANSFAC yes 118260110
chr1 27986240 27986261 ZNF263 JASPAR yes 27719762
chr1 27986240 27986261 ZNF263 JASPAR yes 118260111
chr1 27986243 27986258 PRDM1 JASPAR yes 27719763
chr1 27986243 27986258 PRDM1 JASPAR yes 118260112
chr1 27986243 27986264 ZNF263 JASPAR yes 27719764
chr1 27986243 27986264 ZNF263 JASPAR yes 118260113
chr1 27986244 27986258 PLAG1 JASPAR yes 27719765
chr1 27986244 27986258 PLAG1 JASPAR yes 118260114
chr1 27986244 27986259 NR2C2 JASPAR yes 27719766
chr1 27986244 27986259 NR2C2 JASPAR yes 118260115
chr1 27986244 27986265 ZNF263 JASPAR yes 27719767
chr1 27986244 27986265 ZNF263 JASPAR yes 118260116
chr1 27986246 27986267 ZNF263 JASPAR yes 27719768
chr1 27986246 27986267 ZNF263 JASPAR yes 118260117
chr1 27986250 27986261 E2F6 JASPAR yes 27719769
chr1 27986250 27986261 E2F6 JASPAR yes 118260118
chr1 27986252 27986260 SP1 TRANSFAC yes 27719770
chr1 27986252 27986260 SP1 TRANSFAC yes 118260119
chr1 27986252 27986262 SP1 JASPAR yes 27719771
chr1 27986252 27986262 SP1 JASPAR yes 118260120
chr1 27986254 27986260 MAZ TRANSFAC yes 27719772
chr1 27986254 27986260 MAZ TRANSFAC yes 118260121
chr1 27986254 27986265 SP1 TRANSFAC yes 27719773
chr1 27986254 27986265 SP1 TRANSFAC yes 118260122
chr1 27986259 27986264 SP1 TRANSFAC yes 27719774
chr1 27986259 27986264 SP1 TRANSFAC yes 118260123
chr1 27986262 27986272 SP1 JASPAR yes 27719775
chr1 27986262 27986272 SP1 JASPAR yes 118260124
chr1 27986271 27986286 HSF1 JASPAR yes 27719776
chr1 27986271 27986286 HSF1 JASPAR yes 118260125
chr1 27986272 27986285 HSF1 JASPAR yes 27719777
chr1 27986272 27986285 HSF2 JASPAR yes 27719778
chr1 27986272 27986285 HSF4 JASPAR yes 27719779
chr1 27986272 27986285 HSF1 JASPAR yes 118260126
chr1 27986272 27986285 HSF2 JASPAR yes 118260127
chr1 27986272 27986285 HSF4 JASPAR yes 118260128
chr1 27986276 27986285 NF-kappaB TRANSFAC yes 27719780
chr1 27986276 27986285 NF-kappaB TRANSFAC yes 118260129
chr1 27986276 27986286 NFKB1 JASPAR yes 27719781
chr1 27986276 27986286 RELA JASPAR yes 27719782
chr1 27986276 27986286 REL JASPAR yes 27719783
chr1 27986276 27986286 NFKB1 JASPAR yes 118260130
chr1 27986276 27986286 RELA JASPAR yes 118260131
chr1 27986276 27986286 REL JASPAR yes 118260132
chr1 27986276 27986287 NFKB1 JASPAR yes 27719784
chr1 27986276 27986287 NFKB1 JASPAR yes 118260133
chr1 27986289 27986302 NR2F1 JASPAR yes 27719785
chr1 27986289 27986302 NR2F1 JASPAR yes 118260134
chr1 27986290 27986298 CREB1 JASPAR yes 27719786
chr1 27986290 27986298 CREB1 JASPAR yes 118260135
chr1 27986293 27986297 ESR1 TRANSFAC yes 27719787
chr1 27986293 27986297 ESR1 TRANSFAC yes 118260136
chr1 27986328 27986340 TFAP2A JASPAR yes 27719788
chr1 27986328 27986340 TFAP2A JASPAR yes 118260137
chr1 27986329 27986338 TFAP2A JASPAR yes 27719789
chr1 27986329 27986338 TFAP2A JASPAR yes 118260138
chr1 27986341 27986345 ESR1 TRANSFAC yes 27719790
chr1 27986341 27986345 ESR1 TRANSFAC yes 118260139
chr1 27986342 27986352 TBX21 JASPAR yes 27719791
chr1 27986342 27986352 TBX21 JASPAR yes 118260140
chr1 27986343 27986351 MGA JASPAR yes 27719792
chr1 27986343 27986351 TBX15 JASPAR yes 27719793
chr1 27986343 27986351 TBX1 JASPAR yes 27719794
chr1 27986343 27986351 TBX4 JASPAR yes 27719795
chr1 27986343 27986351 TBX5 JASPAR yes 27719796
chr1 27986343 27986351 MGA JASPAR yes 118260141
chr1 27986343 27986351 TBX15 JASPAR yes 118260142
chr1 27986343 27986351 TBX1 JASPAR yes 118260143
chr1 27986343 27986351 TBX4 JASPAR yes 118260144
chr1 27986343 27986351 TBX5 JASPAR yes 118260145
chr1 27986343 27986358 AR JASPAR yes 27719797
chr1 27986343 27986358 AR JASPAR yes 118260146
chr1 27986361 27986376 ZIC3 JASPAR yes 27719798
chr1 27986361 27986376 ZIC4 JASPAR yes 27719799
chr1 27986361 27986376 ZIC3 JASPAR yes 118260147
chr1 27986361 27986376 ZIC4 JASPAR yes 118260148
chr1 27986362 27986376 ZIC1 JASPAR yes 27719800
chr1 27986362 27986376 ZIC1 JASPAR yes 118260149
chr1 27986363 27986372 TFAP2A JASPAR yes 27719801
chr1 27986363 27986372 TFAP2A JASPAR yes 118260150
chr1 27986375 27986379 H4TF2 TRANSFAC yes 27719802
chr1 27986375 27986379 H4TF2 TRANSFAC yes 118260151
SNP sites on vista950[chr1:27986111-27986384]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 27986277 rs185088470 G C
HSF1 HSF2 HSF4 NF-kappaB NFKB1 REL RELA
187868
chr1 27986288 rs115159721 C T no 187869
Genes possibly regulated by vista950[chr1:27986111-27986384]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 44831
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 75677
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 87655
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 33894
Expression level of Genes
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miRNAs possibly regulated by vista950[chr1:27986111-27986384]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results