EnhancerDB
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  3. rs185088470[chr1:27986277]
Enhancers that have rs185088470[chr1:27986277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27986111 27986384 vista950
VISTA
Transcript factors that have rs185088470[chr1:27986277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802613
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802614
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802615
chr1 27986271 27986286 HSF1 JASPAR yes 27719776
chr1 27986271 27986286 HSF1 JASPAR yes 118260125
chr1 27986272 27986285 HSF1 JASPAR yes 27719777
chr1 27986272 27986285 HSF2 JASPAR yes 27719778
chr1 27986272 27986285 HSF4 JASPAR yes 27719779
chr1 27986272 27986285 HSF1 JASPAR yes 118260126
chr1 27986272 27986285 HSF2 JASPAR yes 118260127
chr1 27986272 27986285 HSF4 JASPAR yes 118260128
chr1 27986276 27986285 NF-kappaB TRANSFAC yes 27719780
chr1 27986276 27986285 NF-kappaB TRANSFAC yes 118260129
chr1 27986276 27986286 NFKB1 JASPAR yes 27719781
chr1 27986276 27986286 RELA JASPAR yes 27719782
chr1 27986276 27986286 REL JASPAR yes 27719783
chr1 27986276 27986286 NFKB1 JASPAR yes 118260130
chr1 27986276 27986286 RELA JASPAR yes 118260131
chr1 27986276 27986286 REL JASPAR yes 118260132
chr1 27986276 27986287 NFKB1 JASPAR yes 27719784
chr1 27986276 27986287 NFKB1 JASPAR yes 118260133
Genes associated with rs185088470[chr1:27986277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More