EnhancerDB
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  3. vista951[chr1:28011929-28012287]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista951[chr1:28011929-28012287]
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Tissue distribution of vista951
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Transcription factor that possibly regulate vista951[chr1:28011929-28012287]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28011921 28011934 NR2F1 JASPAR yes 27721443
chr1 28011921 28011934 NR2F1 JASPAR yes 118260152
chr1 28011933 28011948 TP53 JASPAR yes 27721444
chr1 28011933 28011948 TP53 JASPAR yes 118260153
chr1 28011941 28011956 NFYB JASPAR yes 27721445
chr1 28011941 28011956 NFYB JASPAR yes 118260154
chr1 28011943 28011959 NFYA JASPAR yes 27721446
chr1 28011943 28011959 NFYA JASPAR yes 118260155
chr1 28011944 28011962 NFYA JASPAR yes 27721447
chr1 28011944 28011962 NFYA JASPAR yes 118260156
chr1 28011948 28011952 H1TF2 TRANSFAC yes 27721448
chr1 28011948 28011952 NFE TRANSFAC yes 27721449
chr1 28011948 28011952 SRF TRANSFAC yes 27721450
chr1 28011948 28011952 H1TF2 TRANSFAC yes 118260157
chr1 28011948 28011952 NFE TRANSFAC yes 118260158
chr1 28011948 28011952 SRF TRANSFAC yes 118260159
chr1 28011962 28011973 EBF1 JASPAR yes 27721451
chr1 28011962 28011973 EBF1 JASPAR yes 118260160
chr1 28011974 28011991 BCL6B JASPAR yes 27721452
chr1 28011974 28011991 BCL6B JASPAR yes 118260161
chr1 28011978 28011999 IRF1 JASPAR yes 27721453
chr1 28011978 28011999 IRF1 JASPAR yes 118260162
chr1 28011982 28011997 STAT2 JASPAR yes 27721454
chr1 28011982 28011997 STAT2 JASPAR yes 118260163
chr1 28011988 28012000 IRF1 JASPAR yes 27721455
chr1 28011988 28012000 IRF1 JASPAR yes 118260164
chr1 28012062 28012072 SP1 JASPAR yes 27721456
chr1 28012062 28012072 SP1 JASPAR yes 118260165
chr1 28012063 28012070 CEBPA TRANSFAC yes 27721457
chr1 28012063 28012070 CEBPA TRANSFAC yes 118260166
chr1 28012068 28012078 SP1 JASPAR yes 27721458
chr1 28012068 28012078 SP1 JASPAR yes 118260167
chr1 28012079 28012100 ZNF263 JASPAR yes 27721459
chr1 28012079 28012100 ZNF263 JASPAR yes 118260168
chr1 28012086 28012092 SP1 TRANSFAC yes 27721460
chr1 28012086 28012092 SP1 TRANSFAC yes 118260169
chr1 28012088 28012101 SMAD2 JASPAR yes 27721461
chr1 28012088 28012101 SMAD2 JASPAR yes 118260170
chr1 28012093 28012105 PKNOX1 JASPAR yes 27721462
chr1 28012093 28012105 PKNOX2 JASPAR yes 27721463
chr1 28012093 28012105 TGIF2 JASPAR yes 27721464
chr1 28012093 28012105 PKNOX1 JASPAR yes 118260171
chr1 28012093 28012105 PKNOX2 JASPAR yes 118260172
chr1 28012093 28012105 TGIF2 JASPAR yes 118260173
chr1 28012094 28012104 ID4 JASPAR yes 27721465
chr1 28012094 28012104 ID4 JASPAR yes 118260174
chr1 28012095 28012104 SNAI2 JASPAR yes 27721466
chr1 28012095 28012104 SNAI2 JASPAR yes 118260175
chr1 28012096 28012101 USF2 TRANSFAC yes 27721467
chr1 28012096 28012101 USF2 TRANSFAC yes 118260176
chr1 28012099 28012103 NFE TRANSFAC yes 27721468
chr1 28012099 28012103 NFE TRANSFAC yes 118260177
chr1 28012113 28012119 NFIC JASPAR yes 27721469
chr1 28012113 28012119 NFIC JASPAR yes 118260178
chr1 28012136 28012151 HSF1 JASPAR yes 27721470
chr1 28012136 28012151 HSF1 JASPAR yes 118260179
chr1 28012137 28012150 HSF1 JASPAR yes 27721471
chr1 28012137 28012150 HSF4 JASPAR yes 27721472
chr1 28012137 28012150 HSF1 JASPAR yes 118260180
chr1 28012137 28012150 HSF4 JASPAR yes 118260181
chr1 28012168 28012183 FOXP1 JASPAR yes 27721473
chr1 28012168 28012183 FOXP1 JASPAR yes 118260182
chr1 28012170 28012185 FOXP1 JASPAR yes 27721474
chr1 28012170 28012185 FOXP1 JASPAR yes 118260183
chr1 28012170 28012191 IRF1 JASPAR yes 27721475
chr1 28012170 28012191 IRF1 JASPAR yes 118260184
chr1 28012173 28012184 FOXP2 JASPAR yes 27721476
chr1 28012173 28012184 FOXP2 JASPAR yes 118260185
chr1 28012174 28012189 STAT2 JASPAR yes 27721477
chr1 28012174 28012189 STAT2 JASPAR yes 118260186
chr1 28012175 28012187 IRF1 JASPAR yes 27721478
chr1 28012175 28012187 IRF1 JASPAR yes 118260187
chr1 28012203 28012224 ZNF263 JASPAR yes 27721479
chr1 28012203 28012224 ZNF263 JASPAR yes 118260188
chr1 28012217 28012238 ZNF263 JASPAR yes 27721480
chr1 28012217 28012238 ZNF263 JASPAR yes 118260189
chr1 28012219 28012229 SP1 JASPAR yes 27721481
chr1 28012219 28012229 SP1 JASPAR yes 118260190
chr1 28012258 28012271 TFAP2A JASPAR yes 27721482
chr1 28012258 28012271 TFAP2A JASPAR yes 118260191
chr1 28012261 28012276 RFX5 JASPAR yes 27721483
chr1 28012261 28012276 RFX5 JASPAR yes 118260192
SNP sites on vista951[chr1:28011929-28012287]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28011952 rs562556902 A G
H1TF2 NFE NFYA NFYB SRF
188033
chr1 28012093 rs150457488 C T
PKNOX1 PKNOX2 SMAD2 TGIF2 ZNF263
188034
chr1 28012218 rs138271287 G A
ZNF263
188035
chr1 28012280 rs2788686 G C no 188036
Genes possibly regulated by vista951[chr1:28011929-28012287]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 27860546 27930942 - AHDC1 ENSG00000126705.9 27930942 0.75 1.0 393 19013
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 0.93 0.97 394 49859
chr1 27992572 27998729 - IFI6 ENSG00000126709.10 27998729 0.76 1.0 395 86800
chr1 28052490 28089633 + FAM76A ENSG00000009780.11 28052490 0.57 0.99 396 59797
chr1 28099694 28150963 + STX12 ENSG00000117758.9 28099694 0.77 0.99 397 12593
Expression level of Genes
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miRNAs possibly regulated by vista951[chr1:28011929-28012287]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results