EnhancerDB
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  3. rs562556902[chr1:28011952]
Enhancers that have rs562556902[chr1:28011952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28006925 28018534 enh11669
Liver (HepG2) Prostate (RWPE1) Large Intestine Bone (Osteoblast) Stomach Placenta Muscle (Myotube) Epithelial (MCF-7)
chr1 28011929 28012287 vista951
VISTA
Transcript factors that have rs562556902[chr1:28011952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28011941 28011956 NFYB JASPAR yes 27721445
chr1 28011941 28011956 NFYB JASPAR yes 118260154
chr1 28011943 28011959 NFYA JASPAR yes 27721446
chr1 28011943 28011959 NFYA JASPAR yes 118260155
chr1 28011944 28011962 NFYA JASPAR yes 27721447
chr1 28011944 28011962 NFYA JASPAR yes 118260156
chr1 28011948 28011952 H1TF2 TRANSFAC yes 27721448
chr1 28011948 28011952 NFE TRANSFAC yes 27721449
chr1 28011948 28011952 SRF TRANSFAC yes 27721450
chr1 28011948 28011952 H1TF2 TRANSFAC yes 118260157
chr1 28011948 28011952 NFE TRANSFAC yes 118260158
chr1 28011948 28011952 SRF TRANSFAC yes 118260159
Genes associated with rs562556902[chr1:28011952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More