EnhancerDB
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  3. vista9668[chr11:12109558-12109847]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista9668[chr11:12109558-12109847]
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Tissue distribution of vista9668
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Transcription factor that possibly regulate vista9668[chr11:12109558-12109847]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr11 12106791 12110990 POLR2A UCSC Txn Factor no Conserved 107958505
chr11 12109731 12110155 CTCF UCSC Txn Factor no Conserved 107958568
chr11 12109824 12110080 RAD21 UCSC Txn Factor no Conserved 107958580
chr11 12109585 12109590 GATA2 JASPAR yes 37419597
chr11 12109585 12109590 GATA2 JASPAR yes 114042335
chr11 12109585 12109603 SRF JASPAR yes 37419598
chr11 12109585 12109603 SRF JASPAR yes 114042336
chr11 12109600 12109613 SMAD2 JASPAR yes 37419599
chr11 12109600 12109613 SMAD2 JASPAR yes 114042337
chr11 12109636 12109640 NFE TRANSFAC yes 37419600
chr11 12109636 12109640 NFE TRANSFAC yes 114042338
chr11 12109637 12109642 GATA2 JASPAR yes 37419601
chr11 12109637 12109642 GATA2 JASPAR yes 114042339
chr11 12109644 12109655 FOXH1 JASPAR yes 37419602
chr11 12109644 12109655 FOXH1 JASPAR yes 114042340
chr11 12109649 12109670 ZNF263 JASPAR yes 37419603
chr11 12109649 12109670 ZNF263 JASPAR yes 114042341
chr11 12109665 12109685 RREB1 JASPAR yes 37419604
chr11 12109665 12109685 RREB1 JASPAR yes 114042342
chr11 12109666 12109677 FOXH1 JASPAR yes 37419605
chr11 12109666 12109677 FOXH1 JASPAR yes 114042343
chr11 12109670 12109676 ZNF354C JASPAR yes 37419606
chr11 12109670 12109676 ZNF354C JASPAR yes 114042344
chr11 12109724 12109728 YY1 TRANSFAC yes 37419607
chr11 12109724 12109728 YY1 TRANSFAC yes 114042345
chr11 12109728 12109734 MZF1 JASPAR yes 37419608
chr11 12109728 12109734 MZF1 JASPAR yes 114042346
chr11 12109762 12109776 TCF7L2 JASPAR yes 37419609
chr11 12109762 12109776 TCF7L2 JASPAR yes 114042347
chr11 12109773 12109784 FOXP2 JASPAR yes 37419610
chr11 12109773 12109784 FOXP2 JASPAR yes 114042348
chr11 12109773 12109787 FOXF2 JASPAR yes 37419611
chr11 12109773 12109787 FOXF2 JASPAR yes 114042349
chr11 12109774 12109782 FOXG1 JASPAR yes 37419612
chr11 12109774 12109782 FOXG1 JASPAR yes 114042350
chr11 12109775 12109786 FOXH1 JASPAR yes 37419613
chr11 12109775 12109786 FOXH1 JASPAR yes 114042351
chr11 12109780 12109785 MYB TRANSFAC yes 37419614
chr11 12109780 12109785 MYB TRANSFAC yes 114042352
chr11 12109781 12109795 IRF7 JASPAR yes 37419615
chr11 12109781 12109795 IRF7 JASPAR yes 114042353
chr11 12109783 12109795 IRF1 JASPAR yes 37419616
chr11 12109783 12109795 IRF1 JASPAR yes 114042354
chr11 12109788 12109802 TLX1 JASPAR yes 37419617
chr11 12109788 12109802 TLX1 JASPAR yes 114042355
chr11 12109838 12109842 NFE TRANSFAC yes 37419618
chr11 12109838 12109842 NFE TRANSFAC yes 114042356
chr11 12109838 12109851 SMAD2 JASPAR yes 37419619
chr11 12109838 12109851 SMAD2 JASPAR yes 114042357
chr11 12109845 12109851 MYC TRANSFAC yes 37419620
chr11 12109845 12109851 MYC TRANSFAC yes 114042358
SNP sites on vista9668[chr11:12109558-12109847]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr11 12109592 rs11022163 T C
POLR2A SRF
1853516
chr11 12109736 rs556593331 C A,G
CTCF POLR2A
1853517
chr11 12109750 rs78306557 C T
CTCF POLR2A
1853518
chr11 12109788 rs539677975 G C
CTCF IRF1 IRF7 POLR2A TLX1
1853519
chr11 12109841 rs115190249 G C
CTCF NFE POLR2A RAD21 SMAD2
1853520
Genes possibly regulated by vista9668[chr11:12109558-12109847]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr11 11984653 12031316 - DKK3 ENSG00000050165.13 12031316 0.91 1.0 10584 21758
chr11 12115543 12285334 + MICAL2 ENSG00000133816.9 12115543 0.82 1.0 10585 94304
Expression level of Genes
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miRNAs possibly regulated by vista9668[chr11:12109558-12109847]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results