EnhancerDB
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  3. rs539677975[chr11:12109788]
Enhancers that have rs539677975[chr11:12109788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12104965 12110455 enh13775
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Thyroid Muscle (Myoblast) Uterus Blood (T-cell) Heart
chr11 12109558 12109847 vista9668
VISTA
Transcript factors that have rs539677975[chr11:12109788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12106791 12110990 POLR2A UCSC Txn Factor no Conserved 107958505
chr11 12108564 12111708 ZNF274 GTRD no Bone Marrow (K562) 107958506
chr11 12108564 12111708 ZNF274 GTRD no Bone Marrow (K562) 107958507
chr11 12108924 12110256 AR GTRD no Prostate (PC-3) 21471322
chr11 12108924 12110256 AR GTRD no Prostate (PC-3) 107958508
chr11 12108931 12112566 ZNF274 GTRD no Bone Marrow (K562) 107958509
chr11 12108931 12112566 ZNF274 GTRD no Bone Marrow (K562) 107958510
chr11 12108942 12112233 ZBTB33 GTRD no Lung (A549) 107958511
chr11 12108942 12112233 ZBTB33 GTRD no Lung (A549) 107958512
chr11 12109013 12112356 ZNF274 GTRD no Bone Marrow (K562) 107958513
chr11 12109013 12112356 ZNF274 GTRD no Bone Marrow (K562) 107958514
chr11 12109080 12109980 ZBTB33 GTRD no Lung (A549) 107958515
chr11 12109110 12110621 ZNF274 GTRD no Bone Marrow (K562) 107958516
chr11 12109159 12110546 ZBTB33 GTRD no Lung (A549) 107958517
chr11 12109223 12109893 ZBTB33 GTRD no Lung (A549) 107958518
chr11 12109254 12109938 ZBTB33 GTRD no Lung (A549) 107958519
chr11 12109268 12110513 ZBTB33 GTRD no Lung (A549) 107958520
chr11 12109292 12109885 ZBTB33 GTRD no Lung (A549) 107958521
chr11 12109294 12109906 ZBTB33 GTRD no Lung (A549) 107958522
chr11 12109294 12110610 ZBTB33 GTRD no Lung (A549) 107958523
chr11 12109363 12111436 ZBTB33 GTRD no Lung (A549) 107958524
chr11 12109392 12110523 ZNF274 GTRD no Bone Marrow (K562) 107958525
chr11 12109407 12111528 ZNF274 GTRD no Cervix (HeLa-S3) 21471326
chr11 12109407 12111528 ZNF274 GTRD no Cervix (HeLa-S3) 107958526
chr11 12109446 12110855 ZNF274 GTRD no Bone Marrow (K562) 107958527
chr11 12109462 12109864 ZBTB33 GTRD no Lung (A549) 107958528
chr11 12109462 12110754 ZNF274 GTRD no Bone Marrow (K562) 107958529
chr11 12109465 12110458 ZNF274 GTRD no Bone Marrow (K562) 107958530
chr11 12109470 12110374 ZNF274 GTRD no Bone Marrow (K562) 107958531
chr11 12109484 12110832 ZBTB33 GTRD no Lung (A549) 107958532
chr11 12109486 12111574 ZNF274 GTRD no Bone Marrow (K562) 107958533
chr11 12109490 12109799 ZBTB33 GTRD no Lung (A549) 107958534
chr11 12109495 12110683 ZNF274 GTRD no Bone Marrow (K562) 107958535
chr11 12109497 12110249 ZNF274 GTRD no Bone Marrow (K562) 107958536
chr11 12109502 12109833 ZBTB33 GTRD no Lung (A549) 107958537
chr11 12109502 12110753 ZBTB33 GTRD no Lung (A549) 107958538
chr11 12109510 12110733 ZBTB33 GTRD no Lung (A549) 107958540
chr11 12109515 12111254 ZNF274 GTRD no Bone Marrow (K562) 107958541
chr11 12109527 12109971 ZNF274 GTRD no Bone Marrow (K562) 107958542
chr11 12109532 12111830 ZNF274 GTRD no Bone Marrow (K562) 107958543
chr11 12109532 12111830 ZNF274 GTRD no Bone Marrow (K562) 107958544
chr11 12109542 12111752 ZNF143 GTRD no Epithelial (MCF-7) 107958545
chr11 12109542 12111752 ZNF143 GTRD no Epithelial (MCF-7) 107958546
chr11 12109543 12111399 ZNF274 GTRD no Bone Marrow (K562) 107958547
chr11 12109561 12111724 ZNF274 GTRD no Bone Marrow (K562) 107958548
chr11 12109561 12111724 ZNF274 GTRD no Bone Marrow (K562) 107958549
chr11 12109567 12111207 ZNF274 GTRD no Bone Marrow (K562) 107958550
chr11 12109568 12111630 ZNF274 GTRD no Bone Marrow (K562) 107958551
chr11 12109573 12110741 ZNF274 GTRD no Bone Marrow (K562) 107958552
chr11 12109584 12110524 ZNF274 GTRD no Bone Marrow (K562) 107958553
chr11 12109592 12110537 ZBTB33 GTRD no Lung (A549) 107958554
chr11 12109607 12110218 ZNF274 GTRD no Bone Marrow (K562) 107958555
chr11 12109635 12110446 ZBTB33 GTRD no Lung (A549) 107958556
chr11 12109646 12110488 ZNF274 GTRD no Bone Marrow (K562) 107958557
chr11 12109648 12110728 ZNF274 GTRD no Cervix (HeLa-S3) 21471328
chr11 12109648 12110728 ZNF274 GTRD no Cervix (HeLa-S3) 107958558
chr11 12109682 12111830 ZBTB33 GTRD no Lung (A549) 107958559
chr11 12109682 12111830 ZBTB33 GTRD no Lung (A549) 107958560
chr11 12109697 12111661 ZBTB33 GTRD no Lung (A549) 107958561
chr11 12109697 12111661 ZBTB33 GTRD no Lung (A549) 107958562
chr11 12109704 12110597 ZBTB33 GTRD no Lung (A549) 107958563
chr11 12109712 12111322 ZNF274 GTRD no Bone Marrow (K562) 107958564
chr11 12109712 12111598 ZNF274 GTRD no Bone Marrow (K562) 107958565
chr11 12109715 12111319 ZNF143 GTRD no Epithelial (MCF-7) 107958566
chr11 12109717 12110824 ZNF274 GTRD no Bone Marrow (K562) 107958567
chr11 12109731 12110155 CTCF UCSC Txn Factor no Conserved 107958568
chr11 12109769 12110139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107958569
chr11 12109781 12109795 IRF7 JASPAR yes 37419615
chr11 12109781 12109795 IRF7 JASPAR yes 114042353
chr11 12109783 12109795 IRF1 JASPAR yes 37419616
chr11 12109783 12109795 IRF1 JASPAR yes 114042354
chr11 12109788 12109802 TLX1 JASPAR yes 37419617
chr11 12109788 12109802 TLX1 JASPAR yes 114042355
chr11 12109788 12111639 TCF7L2 GTRD no Colon (HCT116) 107958570
Genes associated with rs539677975[chr11:12109788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More