EnhancerDB
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  3. vista978[chr1:28439074-28439949]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista978[chr1:28439074-28439949]
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Tissue distribution of vista978
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Transcription factor that possibly regulate vista978[chr1:28439074-28439949]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28439070 28439087 RARA JASPAR yes 27742017
chr1 28439070 28439087 RARA JASPAR yes 118261523
chr1 28439082 28439087 GATA2 JASPAR yes 27742018
chr1 28439082 28439087 GATA2 JASPAR yes 118261524
chr1 28439092 28439101 ZEB1 JASPAR yes 27742019
chr1 28439092 28439101 ZEB1 JASPAR yes 118261525
chr1 28439103 28439114 NFKB1 JASPAR yes 27742020
chr1 28439103 28439114 NFKB1 JASPAR yes 118261526
chr1 28439104 28439114 RELA JASPAR yes 27742021
chr1 28439104 28439114 RELA JASPAR yes 118261527
chr1 28439120 28439135 RUNX2 JASPAR yes 27742022
chr1 28439120 28439135 RUNX2 JASPAR yes 118261528
chr1 28439123 28439134 RUNX1 JASPAR yes 27742023
chr1 28439123 28439134 RUNX1 JASPAR yes 118261529
chr1 28439124 28439134 RUNX3 JASPAR yes 27742024
chr1 28439124 28439134 RUNX3 JASPAR yes 118261530
chr1 28439125 28439134 RUNX2 JASPAR yes 27742025
chr1 28439125 28439134 RUNX2 JASPAR yes 118261531
chr1 28439151 28439161 FIGLA JASPAR yes 27742026
chr1 28439151 28439161 FIGLA JASPAR yes 118261532
chr1 28439153 28439158 USF2 TRANSFAC yes 27742027
chr1 28439153 28439158 USF2 TRANSFAC yes 118261533
chr1 28439171 28439177 HiNF-A TRANSFAC yes 27742028
chr1 28439171 28439177 HiNF-A TRANSFAC yes 118261534
chr1 28439185 28439190 SP1 TRANSFAC yes 27742029
chr1 28439185 28439190 SP1 TRANSFAC yes 118261535
chr1 28439190 28439200 MZF1 JASPAR yes 27742030
chr1 28439190 28439200 MZF1 JASPAR yes 118261536
chr1 28439210 28439230 RREB1 JASPAR yes 27742031
chr1 28439210 28439230 RREB1 JASPAR yes 118261537
chr1 28439215 28439223 TBX5 JASPAR yes 27742032
chr1 28439215 28439223 TBX5 JASPAR yes 118261538
chr1 28439226 28439231 SP1 TRANSFAC yes 27742033
chr1 28439226 28439231 SP1 TRANSFAC yes 118261539
chr1 28439242 28439246 YY1 TRANSFAC yes 27742034
chr1 28439242 28439246 YY1 TRANSFAC yes 118261540
chr1 28439248 28439251 MYB TRANSFAC yes 27742035
chr1 28439248 28439251 MYB TRANSFAC yes 118261541
chr1 28439255 28439268 ZBTB18 JASPAR yes 27742036
chr1 28439255 28439268 ZBTB18 JASPAR yes 118261542
chr1 28439273 28439291 ESR1 JASPAR yes 27742037
chr1 28439273 28439291 ESR2 JASPAR yes 27742038
chr1 28439273 28439291 ESR1 JASPAR yes 118261543
chr1 28439273 28439291 ESR2 JASPAR yes 118261544
chr1 28439276 28439280 ESR1 TRANSFAC yes 27742039
chr1 28439276 28439280 ESR1 TRANSFAC yes 118261545
chr1 28439304 28439321 BCL6B JASPAR yes 27742040
chr1 28439304 28439321 BCL6B JASPAR yes 118261546
chr1 28439308 28439318 MZF1 JASPAR yes 27742041
chr1 28439308 28439318 MZF1 JASPAR yes 118261547
chr1 28439315 28439321 HiNF-A TRANSFAC yes 27742042
chr1 28439315 28439321 HiNF-A TRANSFAC yes 118261548
chr1 28439321 28439335 JUN JASPAR yes 27742043
chr1 28439321 28439335 JUN JASPAR yes 118261549
chr1 28439323 28439334 BATF JASPAR yes 27742044
chr1 28439323 28439334 BATF JASPAR yes 118261550
chr1 28439324 28439335 FOSL2 JASPAR yes 27742045
chr1 28439324 28439335 JUNB JASPAR yes 27742046
chr1 28439324 28439335 FOSL2 JASPAR yes 118261551
chr1 28439324 28439335 JUNB JASPAR yes 118261552
chr1 28439325 28439336 FOS JASPAR yes 27742047
chr1 28439325 28439336 FOSL1 JASPAR yes 27742048
chr1 28439325 28439336 JUND JASPAR yes 27742049
chr1 28439325 28439336 NFE2 JASPAR yes 27742050
chr1 28439325 28439336 FOS JASPAR yes 118261553
chr1 28439325 28439336 FOSL1 JASPAR yes 118261554
chr1 28439325 28439336 JUND JASPAR yes 118261555
chr1 28439325 28439336 NFE2 JASPAR yes 118261556
chr1 28439326 28439335 JDP2 JASPAR yes 27742051
chr1 28439326 28439335 JDP2 JASPAR yes 118261557
chr1 28439326 28439337 JUNB JASPAR yes 27742052
chr1 28439326 28439337 NFE2L2 JASPAR yes 27742053
chr1 28439326 28439337 JUNB JASPAR yes 118261558
chr1 28439326 28439337 NFE2L2 JASPAR yes 118261559
chr1 28439326 28439340 JUN JASPAR yes 27742054
chr1 28439326 28439340 JUN JASPAR yes 118261560
chr1 28439327 28439338 BATF JASPAR yes 27742055
chr1 28439327 28439338 BATF JASPAR yes 118261561
chr1 28439338 28439349 FLI1 JASPAR yes 27742056
chr1 28439338 28439349 FLI1 JASPAR yes 118261562
chr1 28439339 28439352 ELF1 JASPAR yes 27742057
chr1 28439339 28439352 ELF1 JASPAR yes 118261563
chr1 28439340 28439347 SPI1 JASPAR yes 27742058
chr1 28439340 28439347 SPI1 JASPAR yes 118261564
chr1 28439340 28439348 FEV JASPAR yes 27742059
chr1 28439340 28439348 FEV JASPAR yes 118261565
chr1 28439342 28439347 ETS2 TRANSFAC yes 27742060
chr1 28439342 28439347 ETS2 TRANSFAC yes 118261566
chr1 28439367 28439382 HNF4G JASPAR yes 27742061
chr1 28439367 28439382 HNF4G JASPAR yes 118261567
chr1 28439368 28439383 HNF4A JASPAR yes 27742062
chr1 28439368 28439383 HNF4A JASPAR yes 118261568
chr1 28439383 28439403 PPARG JASPAR yes 27742063
chr1 28439383 28439403 PPARG JASPAR yes 118261569
chr1 28439385 28439403 ESR2 JASPAR yes 27742064
chr1 28439385 28439403 ESR2 JASPAR yes 118261570
chr1 28439386 28439401 ESR2 JASPAR yes 27742065
chr1 28439386 28439401 ESR2 JASPAR yes 118261571
chr1 28439391 28439396 MYC TRANSFAC yes 27742066
chr1 28439391 28439396 MYC TRANSFAC yes 118261572
chr1 28439402 28439413 BATF JASPAR yes 27742067
chr1 28439402 28439413 BATF JASPAR yes 118261573
chr1 28439405 28439416 JUNB JASPAR yes 27742068
chr1 28439405 28439416 JUNB JASPAR yes 118261574
chr1 28439405 28439419 JUN JASPAR yes 27742069
chr1 28439405 28439419 JUN JASPAR yes 118261575
chr1 28439420 28439424 ESR1 TRANSFAC yes 27742070
chr1 28439420 28439424 ESR1 TRANSFAC yes 118261576
chr1 28439437 28439453 NFYA JASPAR yes 27742071
chr1 28439437 28439453 NFYA JASPAR yes 118261577
chr1 28439442 28439447 NFY TRANSFAC yes 27742072
chr1 28439442 28439447 NFY TRANSFAC yes 118261578
chr1 28439444 28439450 NFIC JASPAR yes 27742073
chr1 28439444 28439450 NFIC JASPAR yes 118261579
chr1 28439450 28439461 USF2 JASPAR yes 27742074
chr1 28439450 28439461 USF2 JASPAR yes 118261580
chr1 28439471 28439485 PLAG1 JASPAR yes 27742075
chr1 28439471 28439485 PLAG1 JASPAR yes 118261581
chr1 28439472 28439477 TFAP2A TRANSFAC yes 27742076
chr1 28439472 28439477 TFAP2A TRANSFAC yes 118261582
chr1 28439472 28439478 MZF1 JASPAR yes 27742077
chr1 28439472 28439478 MZF1 JASPAR yes 118261583
chr1 28439473 28439483 SP1 JASPAR yes 27742078
chr1 28439473 28439483 SP1 JASPAR yes 118261584
chr1 28439474 28439486 INSM1 JASPAR yes 27742079
chr1 28439474 28439486 INSM1 JASPAR yes 118261585
chr1 28439475 28439485 MZF1 JASPAR yes 27742080
chr1 28439475 28439485 MZF1 JASPAR yes 118261586
chr1 28439475 28439489 SPI1 JASPAR yes 27742081
chr1 28439475 28439489 SPI1 JASPAR yes 118261587
chr1 28439480 28439491 NFKB1 JASPAR yes 27742082
chr1 28439480 28439491 NFKB1 JASPAR yes 118261588
chr1 28439481 28439486 ETS2 TRANSFAC yes 27742083
chr1 28439481 28439486 ETS2 TRANSFAC yes 118261589
chr1 28439481 28439491 NFKB1 JASPAR yes 27742084
chr1 28439481 28439491 REL JASPAR yes 27742085
chr1 28439481 28439491 NFKB1 JASPAR yes 118261590
chr1 28439481 28439491 REL JASPAR yes 118261591
chr1 28439481 28439492 NFKB1 JASPAR yes 27742086
chr1 28439481 28439492 NFKB1 JASPAR yes 118261592
chr1 28439494 28439499 ETS2 TRANSFAC yes 27742087
chr1 28439494 28439499 ETS2 TRANSFAC yes 118261593
chr1 28439494 28439502 EHF JASPAR yes 27742088
chr1 28439494 28439502 EHF JASPAR yes 118261594
chr1 28439498 28439503 ETS2 TRANSFAC yes 27742089
chr1 28439498 28439503 ETS2 TRANSFAC yes 118261595
chr1 28439532 28439544 YY1 JASPAR yes 27742090
chr1 28439532 28439544 YY1 JASPAR yes 118261596
chr1 28439545 28439549 LFA1 TRANSFAC yes 27742091
chr1 28439545 28439549 LFA1 TRANSFAC yes 118261597
chr1 28439607 28439616 THAP1 JASPAR yes 27742092
chr1 28439607 28439616 THAP1 JASPAR yes 118261598
chr1 28439610 28439614 LFA1 TRANSFAC yes 27742093
chr1 28439610 28439614 LFA1 TRANSFAC yes 118261599
chr1 28439614 28439627 HSF2 JASPAR yes 27742094
chr1 28439614 28439627 HSF2 JASPAR yes 118261600
chr1 28439635 28439655 RREB1 JASPAR yes 27742095
chr1 28439635 28439655 RREB1 JASPAR yes 118261601
chr1 28439636 28439657 ZNF263 JASPAR yes 27742096
chr1 28439636 28439657 ZNF263 JASPAR yes 118261602
chr1 28439638 28439643 SP1 TRANSFAC yes 27742097
chr1 28439638 28439643 SP1 TRANSFAC yes 118261603
chr1 28439639 28439644 SP1 TRANSFAC yes 27742098
chr1 28439639 28439644 SP1 TRANSFAC yes 118261604
chr1 28439640 28439660 RREB1 JASPAR yes 27742099
chr1 28439640 28439660 RREB1 JASPAR yes 118261605
chr1 28439643 28439648 SP1 TRANSFAC yes 27742100
chr1 28439643 28439648 SP1 TRANSFAC yes 118261606
chr1 28439645 28439666 ZNF263 JASPAR yes 27742101
chr1 28439645 28439666 ZNF263 JASPAR yes 118261607
chr1 28439648 28439669 ZNF263 JASPAR yes 27742102
chr1 28439648 28439669 ZNF263 JASPAR yes 118261608
chr1 28439653 28439674 ZNF263 JASPAR yes 27742103
chr1 28439653 28439674 ZNF263 JASPAR yes 118261609
chr1 28439657 28439668 E2F6 JASPAR yes 27742104
chr1 28439657 28439668 E2F6 JASPAR yes 118261610
chr1 28439685 28439689 YY1 TRANSFAC yes 27742105
chr1 28439685 28439689 YY1 TRANSFAC yes 118261611
chr1 28439699 28439702 MYB TRANSFAC yes 27742106
chr1 28439699 28439702 MYB TRANSFAC yes 118261612
chr1 28439699 28439710 RUNX1 JASPAR yes 27742107
chr1 28439699 28439710 RUNX1 JASPAR yes 118261613
chr1 28439705 28439709 YY1 TRANSFAC yes 27742108
chr1 28439705 28439709 YY1 TRANSFAC yes 118261614
chr1 28439709 28439720 FLI1 JASPAR yes 27742109
chr1 28439709 28439720 FLI1 JASPAR yes 118261615
chr1 28439710 28439720 ERG JASPAR yes 27742110
chr1 28439710 28439720 ETS1 JASPAR yes 27742111
chr1 28439710 28439720 FLI1 JASPAR yes 27742112
chr1 28439710 28439720 ERG JASPAR yes 118261616
chr1 28439710 28439720 ETS1 JASPAR yes 118261617
chr1 28439710 28439720 FLI1 JASPAR yes 118261618
chr1 28439710 28439721 ETV2 JASPAR yes 27742113
chr1 28439710 28439721 ETV2 JASPAR yes 118261619
chr1 28439712 28439723 STAT1 JASPAR yes 27742114
chr1 28439712 28439723 STAT1 JASPAR yes 118261620
chr1 28439715 28439723 MEIS2 JASPAR yes 27742115
chr1 28439715 28439723 MEIS3 JASPAR yes 27742116
chr1 28439715 28439723 MEIS2 JASPAR yes 118261621
chr1 28439715 28439723 MEIS3 JASPAR yes 118261622
chr1 28439716 28439720 NFE TRANSFAC yes 27742117
chr1 28439716 28439720 NFE TRANSFAC yes 118261623
chr1 28439716 28439723 MEIS1 JASPAR yes 27742118
chr1 28439716 28439723 MEIS1 JASPAR yes 118261624
chr1 28439733 28439752 CTCF JASPAR yes 27742119
chr1 28439733 28439752 CTCF JASPAR yes 118261625
chr1 28439735 28439741 NFE2 TRANSFAC yes 27742120
chr1 28439735 28439741 NFE2 TRANSFAC yes 118261626
chr1 28439737 28439751 EBF1 JASPAR yes 27742121
chr1 28439737 28439751 EBF1 JASPAR yes 118261627
chr1 28439738 28439752 PLAG1 JASPAR yes 27742122
chr1 28439738 28439752 PLAG1 JASPAR yes 118261628
chr1 28439739 28439750 EBF1 JASPAR yes 27742123
chr1 28439739 28439750 EBF1 JASPAR yes 118261629
chr1 28439753 28439763 CUX1 JASPAR yes 27742124
chr1 28439753 28439763 CUX2 JASPAR yes 27742125
chr1 28439753 28439763 CUX1 JASPAR yes 118261630
chr1 28439753 28439763 CUX2 JASPAR yes 118261631
chr1 28439756 28439767 FOXH1 JASPAR yes 27742126
chr1 28439756 28439767 FOXH1 JASPAR yes 118261632
chr1 28439773 28439788 RFX5 JASPAR yes 27742127
chr1 28439773 28439788 RFX5 JASPAR yes 118261633
chr1 28439782 28439788 TCF4 TRANSFAC yes 27742128
chr1 28439782 28439788 TCF4 TRANSFAC yes 118261634
chr1 28439822 28439826 YY1 TRANSFAC yes 27742129
chr1 28439822 28439826 YY1 TRANSFAC yes 118261635
chr1 28439855 28439859 YY1 TRANSFAC yes 27742130
chr1 28439855 28439859 YY1 TRANSFAC yes 118261636
chr1 28439893 28439904 FOXH1 JASPAR yes 27742131
chr1 28439893 28439904 FOXH1 JASPAR yes 118261637
chr1 28439905 28439911 GATA3 JASPAR yes 27742132
chr1 28439905 28439911 GATA3 JASPAR yes 118261638
chr1 28439905 28439920 HSF1 JASPAR yes 27742133
chr1 28439905 28439920 HSF1 JASPAR yes 118261639
chr1 28439910 28439921 STAT3 JASPAR yes 27742134
chr1 28439910 28439921 STAT3 JASPAR yes 118261640
chr1 28439933 28439937 YY1 TRANSFAC yes 27742135
chr1 28439933 28439937 YY1 TRANSFAC yes 118261641
SNP sites on vista978[chr1:28439074-28439949]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28439173 rs10553240 AAC A
HiNF-A
190055
chr1 28439173 rs3063999 AAC A
HiNF-A
190056
chr1 28439183 rs534359714 G T no 190057
chr1 28439523 rs79089742 A G no 190058
chr1 28439566 rs75481431 T C no 190059
chr1 28439590 rs72658389 C T no 190060
chr1 28439630 rs12031604 G C no 190061
chr1 28439813 rs61786974 C T no 190062
Genes possibly regulated by vista978[chr1:28439074-28439949]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 76133
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 19502
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 12797
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 12879
Expression level of Genes
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miRNAs possibly regulated by vista978[chr1:28439074-28439949]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results