EnhancerDB
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  3. rs10553240[chr1:28439173]
Enhancers that have rs10553240[chr1:28439173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28435205 28444028 enh11675
Bone Marrow (K562) Prostate (PC-3) Large Intestine Astrocyte Blood (GM12878) Placenta Lung (PC-9)
chr1 28439074 28439949 vista978
VISTA
Transcript factors that have rs10553240[chr1:28439173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28436464 28440065 ZNF274 GTRD no Bone Marrow (K562) 107802637
chr1 28436464 28440065 ZNF274 GTRD no Bone Marrow (K562) 107802638
chr1 28436464 28440065 ZNF274 GTRD no Bone Marrow (K562) 107802639
chr1 28439171 28439177 HiNF-A TRANSFAC yes 27742028
chr1 28439171 28439177 HiNF-A TRANSFAC yes 118261534
Genes associated with rs10553240[chr1:28439173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More