EnhancerDB
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  3. vista984[chr1:28463413-28463582]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista984[chr1:28463413-28463582]
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Tissue distribution of vista984
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Transcription factor that possibly regulate vista984[chr1:28463413-28463582]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28463424 28463429 TFAP2A TRANSFAC yes 27745320
chr1 28463424 28463429 TFAP2A TRANSFAC yes 118261905
chr1 28463424 28463430 MZF1 JASPAR yes 27745321
chr1 28463424 28463430 MZF1 JASPAR yes 118261906
chr1 28463443 28463448 GATA2 JASPAR yes 27745322
chr1 28463443 28463448 GATA2 JASPAR yes 118261907
chr1 28463459 28463464 TFAP2A TRANSFAC yes 27745323
chr1 28463459 28463464 TFAP2A TRANSFAC yes 118261908
chr1 28463459 28463465 MZF1 JASPAR yes 27745324
chr1 28463459 28463465 MZF1 JASPAR yes 118261909
chr1 28463460 28463471 NFKB1 JASPAR yes 27745325
chr1 28463460 28463471 NFKB1 JASPAR yes 118261910
chr1 28463461 28463466 ETS2 TRANSFAC yes 27745326
chr1 28463461 28463466 ETS2 TRANSFAC yes 118261911
chr1 28463477 28463495 MAFF JASPAR yes 27745327
chr1 28463477 28463495 MAFF JASPAR yes 118261912
chr1 28463479 28463494 MAFK JASPAR yes 27745328
chr1 28463479 28463494 MAFK JASPAR yes 118261913
chr1 28463479 28463497 NFYA JASPAR yes 27745329
chr1 28463479 28463497 NFYA JASPAR yes 118261914
chr1 28463482 28463498 NFYA JASPAR yes 27745330
chr1 28463482 28463498 NFYA JASPAR yes 118261915
chr1 28463485 28463500 NFYB JASPAR yes 27745331
chr1 28463485 28463500 NFYB JASPAR yes 118261916
chr1 28463487 28463492 NFY TRANSFAC yes 27745332
chr1 28463487 28463492 NFY TRANSFAC yes 118261917
chr1 28463491 28463495 ESR1 TRANSFAC yes 27745333
chr1 28463491 28463495 ESR1 TRANSFAC yes 118261918
chr1 28463496 28463500 ESR1 TRANSFAC yes 27745334
chr1 28463496 28463500 ESR1 TRANSFAC yes 118261919
chr1 28463498 28463511 JUN JASPAR yes 27745335
chr1 28463498 28463511 JUN JASPAR yes 118261920
chr1 28463499 28463512 ATF4 JASPAR yes 27745336
chr1 28463499 28463512 ATF4 JASPAR yes 118261921
chr1 28463500 28463511 CEBPA JASPAR yes 27745337
chr1 28463500 28463511 CEBPA JASPAR yes 118261922
chr1 28463501 28463512 CEBPB JASPAR yes 27745338
chr1 28463501 28463512 CEBPB JASPAR yes 118261923
chr1 28463501 28463514 DUXA JASPAR yes 27745339
chr1 28463501 28463514 DUXA JASPAR yes 118261924
chr1 28463502 28463513 DUX4 JASPAR yes 27745340
chr1 28463502 28463513 DUX4 JASPAR yes 118261925
chr1 28463502 28463516 BATF3 JASPAR yes 27745341
chr1 28463502 28463516 BATF3 JASPAR yes 118261926
chr1 28463513 28463533 ESR1 JASPAR yes 27745342
chr1 28463513 28463533 ESR1 JASPAR yes 118261927
chr1 28463514 28463519 ETS2 TRANSFAC yes 27745343
chr1 28463514 28463519 ETS2 TRANSFAC yes 118261928
chr1 28463516 28463536 PPARG JASPAR yes 27745344
chr1 28463516 28463536 PPARG JASPAR yes 118261929
chr1 28463518 28463533 ESR2 JASPAR yes 27745345
chr1 28463518 28463533 ESR2 JASPAR yes 118261930
chr1 28463526 28463530 NFE TRANSFAC yes 27745346
chr1 28463526 28463530 NFE TRANSFAC yes 118261931
chr1 28463534 28463548 JUN JASPAR yes 27745347
chr1 28463534 28463548 JUN JASPAR yes 118261932
chr1 28463536 28463547 BATF JASPAR yes 27745348
chr1 28463536 28463547 BATF JASPAR yes 118261933
chr1 28463537 28463548 FOSL2 JASPAR yes 27745349
chr1 28463537 28463548 JUNB JASPAR yes 27745350
chr1 28463537 28463548 NFE2L2 JASPAR yes 27745351
chr1 28463537 28463548 FOSL2 JASPAR yes 118261934
chr1 28463537 28463548 JUNB JASPAR yes 118261935
chr1 28463537 28463548 NFE2L2 JASPAR yes 118261936
chr1 28463538 28463549 FOS JASPAR yes 27745352
chr1 28463538 28463549 FOSL1 JASPAR yes 27745353
chr1 28463538 28463549 JUND JASPAR yes 27745354
chr1 28463538 28463549 FOS JASPAR yes 118261937
chr1 28463538 28463549 FOSL1 JASPAR yes 118261938
chr1 28463538 28463549 JUND JASPAR yes 118261939
chr1 28463539 28463550 JUNB JASPAR yes 27745355
chr1 28463539 28463550 JUNB JASPAR yes 118261940
chr1 28463539 28463553 JUN JASPAR yes 27745356
chr1 28463539 28463553 JUN JASPAR yes 118261941
chr1 28463540 28463547 JUN TRANSFAC yes 27745357
chr1 28463540 28463547 JUN TRANSFAC yes 118261942
chr1 28463540 28463551 BATF JASPAR yes 27745358
chr1 28463540 28463551 BATF JASPAR yes 118261943
chr1 28463549 28463564 ZIC3 JASPAR yes 27745359
chr1 28463549 28463564 ZIC4 JASPAR yes 27745360
chr1 28463549 28463564 ZIC3 JASPAR yes 118261944
chr1 28463549 28463564 ZIC4 JASPAR yes 118261945
chr1 28463550 28463564 GLIS2 JASPAR yes 27745361
chr1 28463550 28463564 GLIS2 JASPAR yes 118261946
chr1 28463553 28463558 SP1 TRANSFAC yes 27745362
chr1 28463553 28463558 SP1 TRANSFAC yes 118261947
chr1 28463553 28463559 SP1 TRANSFAC yes 27745363
chr1 28463553 28463559 SP1 TRANSFAC yes 118261948
chr1 28463553 28463563 SP1 JASPAR yes 27745364
chr1 28463553 28463563 SP1 JASPAR yes 118261949
chr1 28463554 28463564 ZNF740 JASPAR yes 27745365
chr1 28463554 28463564 ZNF740 JASPAR yes 118261950
chr1 28463559 28463564 SP1 TRANSFAC yes 27745366
chr1 28463559 28463564 SP1 TRANSFAC yes 118261951
chr1 28463559 28463574 HNF4A JASPAR yes 27745367
chr1 28463559 28463574 HNF4A JASPAR yes 118261952
SNP sites on vista984[chr1:28463413-28463582]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28463557 rs188204401 G A,C
GLIS2 SP1 ZIC3 ZIC4 ZNF740
190283
chr1 28463577 rs530880772 G A no 190284
Genes possibly regulated by vista984[chr1:28463413-28463582]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 51794
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 43135
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 4046
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 36430
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 36512
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 962
Expression level of Genes
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miRNAs possibly regulated by vista984[chr1:28463413-28463582]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results