EnhancerDB
  1. Home
  2. SNP
  3. rs188204401[chr1:28463557]
Enhancers that have rs188204401[chr1:28463557]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28446825 28468055 enh182
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Stomach
chr1 28463413 28463582 vista984
VISTA
Transcript factors that have rs188204401[chr1:28463557]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28463364 28463734 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107802645
chr1 28463549 28463564 ZIC3 JASPAR yes 27745359
chr1 28463549 28463564 ZIC4 JASPAR yes 27745360
chr1 28463549 28463564 ZIC3 JASPAR yes 118261944
chr1 28463549 28463564 ZIC4 JASPAR yes 118261945
chr1 28463550 28463564 GLIS2 JASPAR yes 27745361
chr1 28463550 28463564 GLIS2 JASPAR yes 118261946
chr1 28463553 28463558 SP1 TRANSFAC yes 27745362
chr1 28463553 28463558 SP1 TRANSFAC yes 118261947
chr1 28463553 28463559 SP1 TRANSFAC yes 27745363
chr1 28463553 28463559 SP1 TRANSFAC yes 118261948
chr1 28463553 28463563 SP1 JASPAR yes 27745364
chr1 28463553 28463563 SP1 JASPAR yes 118261949
chr1 28463554 28463564 ZNF740 JASPAR yes 27745365
chr1 28463554 28463564 ZNF740 JASPAR yes 118261950
Genes associated with rs188204401[chr1:28463557], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More