EnhancerDB
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  3. vista987[chr1:28483198-28483592]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista987[chr1:28483198-28483592]
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Tissue distribution of vista987
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Transcription factor that possibly regulate vista987[chr1:28483198-28483592]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28483254 28483262 EHF JASPAR yes 27747582
chr1 28483254 28483262 EHF JASPAR yes 118262049
chr1 28483256 28483261 ETS2 TRANSFAC yes 27747583
chr1 28483256 28483261 ETS2 TRANSFAC yes 118262050
chr1 28483272 28483281 HIC2 JASPAR yes 27747584
chr1 28483272 28483281 HIC2 JASPAR yes 118262051
chr1 28483276 28483293 PAX1 JASPAR yes 27747585
chr1 28483276 28483293 PAX9 JASPAR yes 27747586
chr1 28483276 28483293 PAX1 JASPAR yes 118262052
chr1 28483276 28483293 PAX9 JASPAR yes 118262053
chr1 28483294 28483315 IRF1 JASPAR yes 27747587
chr1 28483294 28483315 IRF1 JASPAR yes 118262054
chr1 28483333 28483345 TFAP2A JASPAR yes 27747588
chr1 28483333 28483345 TFAP2B JASPAR yes 27747589
chr1 28483333 28483345 TFAP2C JASPAR yes 27747590
chr1 28483333 28483345 TFAP2A JASPAR yes 118262055
chr1 28483333 28483345 TFAP2B JASPAR yes 118262056
chr1 28483333 28483345 TFAP2C JASPAR yes 118262057
chr1 28483333 28483348 TFAP2A JASPAR yes 27747591
chr1 28483333 28483348 TFAP2A JASPAR yes 118262058
chr1 28483336 28483348 ZBTB7B JASPAR yes 27747592
chr1 28483336 28483348 ZBTB7B JASPAR yes 118262059
chr1 28483342 28483346 H4TF2 TRANSFAC yes 27747593
chr1 28483342 28483346 H4TF2 TRANSFAC yes 118262060
chr1 28483343 28483362 RFX2 JASPAR yes 27747594
chr1 28483343 28483362 RFX2 JASPAR yes 118262061
chr1 28483347 28483355 FOXO3 JASPAR yes 27747595
chr1 28483347 28483355 FOXO3 JASPAR yes 118262062
chr1 28483355 28483359 LFA1 TRANSFAC yes 27747596
chr1 28483355 28483359 LFA1 TRANSFAC yes 118262063
chr1 28483365 28483377 SRF JASPAR yes 27747597
chr1 28483365 28483377 SRF JASPAR yes 118262064
chr1 28483368 28483372 YY1 TRANSFAC yes 27747598
chr1 28483368 28483372 YY1 TRANSFAC yes 118262065
chr1 28483374 28483394 RREB1 JASPAR yes 27747599
chr1 28483374 28483394 RREB1 JASPAR yes 118262066
chr1 28483376 28483388 GLI2 JASPAR yes 27747600
chr1 28483376 28483388 GLI2 JASPAR yes 118262067
chr1 28483380 28483395 RFX5 JASPAR yes 27747601
chr1 28483380 28483395 RFX5 JASPAR yes 118262068
chr1 28483384 28483396 INSM1 JASPAR yes 27747602
chr1 28483384 28483396 TFAP2A JASPAR yes 27747603
chr1 28483384 28483396 TFAP2B JASPAR yes 27747604
chr1 28483384 28483396 TFAP2C JASPAR yes 27747605
chr1 28483384 28483396 INSM1 JASPAR yes 118262069
chr1 28483384 28483396 TFAP2A JASPAR yes 118262070
chr1 28483384 28483396 TFAP2B JASPAR yes 118262071
chr1 28483384 28483396 TFAP2C JASPAR yes 118262072
chr1 28483391 28483395 LFA1 TRANSFAC yes 27747606
chr1 28483391 28483395 LFA1 TRANSFAC yes 118262073
chr1 28483398 28483410 NHLH1 JASPAR yes 27747607
chr1 28483398 28483410 NHLH1 JASPAR yes 118262074
chr1 28483398 28483411 ZBTB18 JASPAR yes 27747608
chr1 28483398 28483411 ZBTB18 JASPAR yes 118262075
chr1 28483399 28483409 NHLH1 JASPAR yes 27747609
chr1 28483399 28483409 NHLH1 JASPAR yes 118262076
chr1 28483406 28483410 LFA1 TRANSFAC yes 27747610
chr1 28483406 28483410 LFA1 TRANSFAC yes 118262077
chr1 28483406 28483425 REST JASPAR yes 27747611
chr1 28483406 28483425 REST JASPAR yes 118262078
chr1 28483410 28483430 ESR1 JASPAR yes 27747612
chr1 28483410 28483430 ESR1 JASPAR yes 118262079
chr1 28483411 28483415 LFA1 TRANSFAC yes 27747613
chr1 28483411 28483415 LFA1 TRANSFAC yes 118262080
chr1 28483431 28483443 INSM1 JASPAR yes 27747614
chr1 28483431 28483443 INSM1 JASPAR yes 118262081
chr1 28483438 28483442 LFA1 TRANSFAC yes 27747615
chr1 28483438 28483442 LFA1 TRANSFAC yes 118262082
chr1 28483444 28483456 HINFP JASPAR yes 27747616
chr1 28483444 28483456 HINFP JASPAR yes 118262083
chr1 28483447 28483451 H4TF2 TRANSFAC yes 27747617
chr1 28483447 28483451 H4TF2 TRANSFAC yes 118262084
chr1 28483456 28483477 ZNF263 JASPAR yes 27747618
chr1 28483456 28483477 ZNF263 JASPAR yes 118262085
chr1 28483462 28483474 ZBTB7C JASPAR yes 27747619
chr1 28483462 28483474 ZBTB7C JASPAR yes 118262086
chr1 28483463 28483478 NR2C2 JASPAR yes 27747620
chr1 28483463 28483478 NR2C2 JASPAR yes 118262087
chr1 28483466 28483475 SP1 TRANSFAC yes 27747621
chr1 28483466 28483475 SP1 TRANSFAC yes 118262088
chr1 28483467 28483473 SP1 TRANSFAC yes 27747622
chr1 28483467 28483473 SP1 TRANSFAC yes 118262089
chr1 28483467 28483477 SP1 JASPAR yes 27747623
chr1 28483467 28483477 SP1 JASPAR yes 118262090
chr1 28483468 28483475 SP1 TRANSFAC yes 27747624
chr1 28483468 28483475 SP1 TRANSFAC yes 118262091
chr1 28483469 28483474 SP1 TRANSFAC yes 27747625
chr1 28483469 28483474 SP1 TRANSFAC yes 118262092
chr1 28483469 28483475 SP1 TRANSFAC yes 27747626
chr1 28483469 28483475 SP1 TRANSFAC yes 118262093
chr1 28483469 28483476 SP1 TRANSFAC yes 27747627
chr1 28483469 28483476 SP1 TRANSFAC yes 118262094
chr1 28483470 28483482 INSM1 JASPAR yes 27747628
chr1 28483470 28483482 INSM1 JASPAR yes 118262095
chr1 28483472 28483486 PLAG1 JASPAR yes 27747629
chr1 28483472 28483486 PLAG1 JASPAR yes 118262096
chr1 28483493 28483507 SPIC JASPAR yes 27747630
chr1 28483493 28483507 SPIC JASPAR yes 118262097
chr1 28483494 28483502 EHF JASPAR yes 27747631
chr1 28483494 28483502 EHF JASPAR yes 118262098
chr1 28483496 28483503 SPIB JASPAR yes 27747632
chr1 28483496 28483503 SPIB JASPAR yes 118262099
chr1 28483499 28483509 GABPA JASPAR yes 27747633
chr1 28483499 28483509 GABPA JASPAR yes 118262100
chr1 28483499 28483512 ELF1 JASPAR yes 27747634
chr1 28483499 28483512 ELF1 JASPAR yes 118262101
chr1 28483548 28483554 ETS1 JASPAR yes 27747635
chr1 28483548 28483554 ETS1 JASPAR yes 118262102
chr1 28483589 28483602 SCRT2 JASPAR yes 27747636
chr1 28483589 28483602 SCRT2 JASPAR yes 118262103
SNP sites on vista987[chr1:28483198-28483592]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28483294 rs140905043 G A,C
IRF1
190463
chr1 28483399 rs567158731 T C
NHLH1 ZBTB18
190464
chr1 28483400 rs536018918 C T
NHLH1 ZBTB18
190465
chr1 28483440 rs113095301 G A
INSM1 LFA1
190466
chr1 28483454 rs167523 C T
HINFP
190467
chr1 28483464 rs75746299 C T
NR2C2 ZBTB7C ZNF263
190468
chr1 28483471 rs558220365 C T
INSM1 NR2C2 SP1 ZBTB7C ZNF263
190469
chr1 28483522 rs77257067 T C no 190470
chr1 28483528 rs192060028 C G no 190471
chr1 28483563 rs144635152 A T no 190472
Genes possibly regulated by vista987[chr1:28483198-28483592]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 32009
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 63145
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 24056
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 56440
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 56522
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 20972
Expression level of Genes
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miRNAs possibly regulated by vista987[chr1:28483198-28483592]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results