EnhancerDB
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  3. rs558220365[chr1:28483471]
Enhancers that have rs558220365[chr1:28483471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28477646 28492815 enh183
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr1 28483198 28483592 vista987
VISTA
Transcript factors that have rs558220365[chr1:28483471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28483437 28483701 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802648
chr1 28483456 28483477 ZNF263 JASPAR yes 27747618
chr1 28483456 28483477 ZNF263 JASPAR yes 118262085
chr1 28483462 28483474 ZBTB7C JASPAR yes 27747619
chr1 28483462 28483474 ZBTB7C JASPAR yes 118262086
chr1 28483463 28483478 NR2C2 JASPAR yes 27747620
chr1 28483463 28483478 NR2C2 JASPAR yes 118262087
chr1 28483466 28483475 SP1 TRANSFAC yes 27747621
chr1 28483466 28483475 SP1 TRANSFAC yes 118262088
chr1 28483467 28483473 SP1 TRANSFAC yes 27747622
chr1 28483467 28483473 SP1 TRANSFAC yes 118262089
chr1 28483467 28483477 SP1 JASPAR yes 27747623
chr1 28483467 28483477 SP1 JASPAR yes 118262090
chr1 28483468 28483475 SP1 TRANSFAC yes 27747624
chr1 28483468 28483475 SP1 TRANSFAC yes 118262091
chr1 28483469 28483474 SP1 TRANSFAC yes 27747625
chr1 28483469 28483474 SP1 TRANSFAC yes 118262092
chr1 28483469 28483475 SP1 TRANSFAC yes 27747626
chr1 28483469 28483475 SP1 TRANSFAC yes 118262093
chr1 28483469 28483476 SP1 TRANSFAC yes 27747627
chr1 28483469 28483476 SP1 TRANSFAC yes 118262094
chr1 28483470 28483482 INSM1 JASPAR yes 27747628
chr1 28483470 28483482 INSM1 JASPAR yes 118262095
Genes associated with rs558220365[chr1:28483471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More