EnhancerDB
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  3. vista989[chr1:28486078-28486440]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista989[chr1:28486078-28486440]
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Tissue distribution of vista989
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Transcription factor that possibly regulate vista989[chr1:28486078-28486440]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28486077 28486090 SMAD2 JASPAR yes 27747923
chr1 28486077 28486090 SMAD2 JASPAR yes 118262157
chr1 28486091 28486112 LUN1 TRANSFAC yes 27747924
chr1 28486091 28486112 LUN1 TRANSFAC yes 118262158
chr1 28486129 28486139 RORA JASPAR yes 27747925
chr1 28486129 28486139 RORA JASPAR yes 118262159
chr1 28486130 28486141 ESRRA JASPAR yes 27747926
chr1 28486130 28486141 ESRRA JASPAR yes 118262160
chr1 28486130 28486143 NR2F1 JASPAR yes 27747927
chr1 28486130 28486143 NR2F1 JASPAR yes 118262161
chr1 28486134 28486138 ESR1 TRANSFAC yes 27747928
chr1 28486134 28486138 ESR1 TRANSFAC yes 118262162
chr1 28486159 28486163 H1TF2 TRANSFAC yes 27747929
chr1 28486159 28486163 NFE TRANSFAC yes 27747930
chr1 28486159 28486163 SRF TRANSFAC yes 27747931
chr1 28486159 28486163 H1TF2 TRANSFAC yes 118262163
chr1 28486159 28486163 NFE TRANSFAC yes 118262164
chr1 28486159 28486163 SRF TRANSFAC yes 118262165
chr1 28486163 28486174 CEBPA JASPAR yes 27747932
chr1 28486163 28486174 CEBPA JASPAR yes 118262166
chr1 28486164 28486175 CEBPB JASPAR yes 27747933
chr1 28486164 28486175 CEBPB JASPAR yes 118262167
chr1 28486170 28486181 DUX4 JASPAR yes 27747934
chr1 28486170 28486181 DUX4 JASPAR yes 118262168
chr1 28486179 28486190 CDX2 JASPAR yes 27747935
chr1 28486179 28486190 CDX2 JASPAR yes 118262169
chr1 28486180 28486191 HOXA10 JASPAR yes 27747936
chr1 28486180 28486191 HOXA10 JASPAR yes 118262170
chr1 28486181 28486190 CDX1 JASPAR yes 27747937
chr1 28486181 28486190 CDX1 JASPAR yes 118262171
chr1 28486181 28486191 HOXA13 JASPAR yes 27747938
chr1 28486181 28486191 HOXB13 JASPAR yes 27747939
chr1 28486181 28486191 HOXD13 JASPAR yes 27747940
chr1 28486181 28486191 HOXA13 JASPAR yes 118262172
chr1 28486181 28486191 HOXB13 JASPAR yes 118262173
chr1 28486181 28486191 HOXD13 JASPAR yes 118262174
chr1 28486181 28486196 MEF2C JASPAR yes 27747941
chr1 28486181 28486196 MEF2C JASPAR yes 118262175
chr1 28486182 28486197 MEF2A JASPAR yes 27747942
chr1 28486182 28486197 MEF2A JASPAR yes 118262176
chr1 28486183 28486195 MEF2B JASPAR yes 27747943
chr1 28486183 28486195 MEF2D JASPAR yes 27747944
chr1 28486183 28486195 MEF2B JASPAR yes 118262177
chr1 28486183 28486195 MEF2D JASPAR yes 118262178
chr1 28486212 28486216 TEAD2 TRANSFAC yes 27747945
chr1 28486212 28486216 TEAD2 TRANSFAC yes 118262179
chr1 28486227 28486232 TFAP2A TRANSFAC yes 27747946
chr1 28486227 28486232 TFAP2A TRANSFAC yes 118262180
chr1 28486227 28486233 MZF1 JASPAR yes 27747947
chr1 28486227 28486233 MZF1 JASPAR yes 118262181
chr1 28486227 28486248 ZNF263 JASPAR yes 27747948
chr1 28486227 28486248 ZNF263 JASPAR yes 118262182
chr1 28486269 28486286 ESR1 JASPAR yes 27747949
chr1 28486269 28486286 ESR1 JASPAR yes 118262183
chr1 28486286 28486292 GATA3 JASPAR yes 27747950
chr1 28486286 28486292 GATA3 JASPAR yes 118262184
chr1 28486315 28486330 IRF9 JASPAR yes 27747951
chr1 28486315 28486330 IRF9 JASPAR yes 118262185
chr1 28486316 28486330 IRF8 JASPAR yes 27747952
chr1 28486316 28486330 IRF8 JASPAR yes 118262186
chr1 28486317 28486331 STAT1 JASPAR yes 27747953
chr1 28486317 28486331 STAT1 JASPAR yes 118262187
chr1 28486334 28486349 FOXP1 JASPAR yes 27747954
chr1 28486334 28486349 FOXP1 JASPAR yes 118262188
chr1 28486335 28486350 FOXP1 JASPAR yes 27747955
chr1 28486335 28486350 FOXP1 JASPAR yes 118262189
chr1 28486335 28486356 IRF1 JASPAR yes 27747956
chr1 28486335 28486356 IRF1 JASPAR yes 118262190
chr1 28486336 28486351 FOXP1 JASPAR yes 27747957
chr1 28486336 28486351 FOXP1 JASPAR yes 118262191
chr1 28486338 28486353 FOXP1 JASPAR yes 27747958
chr1 28486338 28486353 FOXP1 JASPAR yes 118262192
chr1 28486338 28486359 IRF1 JASPAR yes 27747959
chr1 28486338 28486359 IRF1 JASPAR yes 118262193
chr1 28486342 28486356 SPI1 JASPAR yes 27747960
chr1 28486342 28486356 SPI1 JASPAR yes 118262194
chr1 28486354 28486366 PBX1 JASPAR yes 27747961
chr1 28486354 28486366 PBX1 JASPAR yes 118262195
chr1 28486357 28486368 CEBPA JASPAR yes 27747962
chr1 28486357 28486368 CEBPA JASPAR yes 118262196
chr1 28486358 28486366 CEBPA TRANSFAC yes 27747963
chr1 28486358 28486366 CEBPA TRANSFAC yes 118262197
chr1 28486358 28486368 CEBPG JASPAR yes 27747964
chr1 28486358 28486368 CEBPG JASPAR yes 118262198
chr1 28486358 28486369 CEBPB JASPAR yes 27747965
chr1 28486358 28486369 CEBPB JASPAR yes 118262199
chr1 28486366 28486384 MAFF JASPAR yes 27747966
chr1 28486366 28486384 MAFF JASPAR yes 118262200
chr1 28486413 28486428 FOXP1 JASPAR yes 27747967
chr1 28486413 28486428 FOXP1 JASPAR yes 118262201
chr1 28486419 28486425 TBP TRANSFAC yes 27747968
chr1 28486419 28486425 TBP TRANSFAC yes 118262202
chr1 28486426 28486430 YY1 TRANSFAC yes 27747969
chr1 28486426 28486430 YY1 TRANSFAC yes 118262203
chr1 28486427 28486437 NFATC3 JASPAR yes 27747970
chr1 28486427 28486437 NFATC3 JASPAR yes 118262204
chr1 28486428 28486435 NFATC2 JASPAR yes 27747971
chr1 28486428 28486435 NFATC2 JASPAR yes 118262205
SNP sites on vista989[chr1:28486078-28486440]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28486115 rs61549489 G A no 190492
chr1 28486251 rs140112481 C T no 190493
chr1 28486319 rs375728118 G A
IRF8 IRF9 STAT1
190494
chr1 28486324 rs576291108 C A
IRF8 IRF9 STAT1
190495
chr1 28486427 rs541976949 T C
FOXP1 NFATC3 YY1
190496
Genes possibly regulated by vista989[chr1:28486078-28486440]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 29129
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 65993
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 26904
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 59288
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 59370
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 23820
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 402
Expression level of Genes
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miRNAs possibly regulated by vista989[chr1:28486078-28486440]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results