EnhancerDB
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  3. rs541976949[chr1:28486427]
Enhancers that have rs541976949[chr1:28486427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28477646 28492815 enh183
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr1 28486078 28486440 vista989
VISTA
Transcript factors that have rs541976949[chr1:28486427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28486413 28486428 FOXP1 JASPAR yes 27747967
chr1 28486413 28486428 FOXP1 JASPAR yes 118262201
chr1 28486426 28486430 YY1 TRANSFAC yes 27747969
chr1 28486426 28486430 YY1 TRANSFAC yes 118262203
chr1 28486427 28486437 NFATC3 JASPAR yes 27747970
chr1 28486427 28486437 NFATC3 JASPAR yes 118262204
Genes associated with rs541976949[chr1:28486427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More