EnhancerDB
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  3. vista992[chr1:28495580-28496044]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista992[chr1:28495580-28496044]
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Tissue distribution of vista992
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Transcription factor that possibly regulate vista992[chr1:28495580-28496044]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 28495587 28495601 RXRG JASPAR yes 27749191
chr1 28495587 28495601 RXRG JASPAR yes 118262306
chr1 28495610 28495613 MYB TRANSFAC yes 27749192
chr1 28495610 28495613 MYB TRANSFAC yes 118262307
chr1 28495621 28495631 MAX JASPAR yes 27749193
chr1 28495621 28495631 MAX JASPAR yes 118262308
chr1 28495621 28495632 USF2 JASPAR yes 27749194
chr1 28495621 28495632 USF2 JASPAR yes 118262309
chr1 28495621 28495633 HES5 JASPAR yes 27749195
chr1 28495621 28495633 HES5 JASPAR yes 118262310
chr1 28495634 28495648 CREB3 JASPAR yes 27749196
chr1 28495634 28495648 CREB3L1 JASPAR yes 27749197
chr1 28495634 28495648 CREB3 JASPAR yes 118262311
chr1 28495634 28495648 CREB3L1 JASPAR yes 118262312
chr1 28495635 28495649 XBP1 JASPAR yes 27749198
chr1 28495635 28495649 XBP1 JASPAR yes 118262313
chr1 28495679 28495685 ZNF354C JASPAR yes 27749199
chr1 28495679 28495685 ZNF354C JASPAR yes 118262314
chr1 28495710 28495720 SMAD3 JASPAR yes 27749200
chr1 28495710 28495720 SMAD3 JASPAR yes 118262315
chr1 28495716 28495735 RFX2 JASPAR yes 27749201
chr1 28495716 28495735 RFX2 JASPAR yes 118262316
chr1 28495741 28495745 TEAD2 TRANSFAC yes 27749202
chr1 28495741 28495745 TEAD2 TRANSFAC yes 118262317
chr1 28495741 28495746 TBP TRANSFAC yes 27749203
chr1 28495741 28495746 TBP TRANSFAC yes 118262318
chr1 28495741 28495747 TFIID TRANSFAC yes 27749204
chr1 28495741 28495747 TFIID TRANSFAC yes 118262319
chr1 28495744 28495760 POU4F3 JASPAR yes 27749205
chr1 28495744 28495760 POU4F3 JASPAR yes 118262320
chr1 28495746 28495760 POU4F1 JASPAR yes 27749206
chr1 28495746 28495760 POU4F1 JASPAR yes 118262321
chr1 28495795 28495810 RUNX2 JASPAR yes 27749207
chr1 28495795 28495810 RUNX2 JASPAR yes 118262322
chr1 28495799 28495814 FOXP1 JASPAR yes 27749208
chr1 28495799 28495814 FOXP1 JASPAR yes 118262323
chr1 28495801 28495822 IRF1 JASPAR yes 27749209
chr1 28495801 28495822 IRF1 JASPAR yes 118262324
chr1 28495803 28495818 FOXP1 JASPAR yes 27749210
chr1 28495803 28495818 FOXP1 JASPAR yes 118262325
chr1 28495804 28495819 FOXP1 JASPAR yes 27749211
chr1 28495804 28495819 FOXP1 JASPAR yes 118262326
chr1 28495805 28495811 TBP TRANSFAC yes 27749212
chr1 28495805 28495811 TBP TRANSFAC yes 118262327
chr1 28495805 28495820 FOXP1 JASPAR yes 27749213
chr1 28495805 28495820 FOXP1 JASPAR yes 118262328
chr1 28495806 28495821 FOXP1 JASPAR yes 27749214
chr1 28495806 28495821 FOXP1 JASPAR yes 118262329
chr1 28495806 28495827 IRF1 JASPAR yes 27749215
chr1 28495806 28495827 IRF1 JASPAR yes 118262330
chr1 28495807 28495822 FOXP1 JASPAR yes 27749216
chr1 28495807 28495822 FOXP1 JASPAR yes 118262331
chr1 28495807 28495828 IRF1 JASPAR yes 27749217
chr1 28495807 28495828 IRF1 JASPAR yes 118262332
chr1 28495808 28495823 FOXP1 JASPAR yes 27749218
chr1 28495808 28495823 FOXP1 JASPAR yes 118262333
chr1 28495816 28495830 ONECUT1 JASPAR yes 27749219
chr1 28495816 28495830 ONECUT2 JASPAR yes 27749220
chr1 28495816 28495830 ONECUT3 JASPAR yes 27749221
chr1 28495816 28495830 ONECUT1 JASPAR yes 118262334
chr1 28495816 28495830 ONECUT2 JASPAR yes 118262335
chr1 28495816 28495830 ONECUT3 JASPAR yes 118262336
chr1 28495820 28495829 SOX9 JASPAR yes 27749222
chr1 28495820 28495829 SOX9 JASPAR yes 118262337
chr1 28495851 28495866 AR JASPAR yes 27749223
chr1 28495851 28495866 AR JASPAR yes 118262338
chr1 28495851 28495868 NR3C1 JASPAR yes 27749224
chr1 28495851 28495868 NR3C2 JASPAR yes 27749225
chr1 28495851 28495868 NR3C1 JASPAR yes 118262339
chr1 28495851 28495868 NR3C2 JASPAR yes 118262340
chr1 28495854 28495870 SOX8 JASPAR yes 27749226
chr1 28495854 28495870 SOX8 JASPAR yes 118262341
chr1 28495859 28495870 FOXH1 JASPAR yes 27749227
chr1 28495859 28495870 FOXH1 JASPAR yes 118262342
chr1 28495859 28495874 MEF2A JASPAR yes 27749228
chr1 28495859 28495874 MEF2A JASPAR yes 118262343
chr1 28495860 28495875 MEF2C JASPAR yes 27749229
chr1 28495860 28495875 MEF2C JASPAR yes 118262344
chr1 28495863 28495867 YY1 TRANSFAC yes 27749230
chr1 28495863 28495867 YY1 TRANSFAC yes 118262345
chr1 28495877 28495888 USF1 JASPAR yes 27749231
chr1 28495877 28495888 USF1 JASPAR yes 118262346
chr1 28495878 28495888 TFEB JASPAR yes 27749232
chr1 28495878 28495888 TFEB JASPAR yes 118262347
chr1 28495878 28495889 USF1 JASPAR yes 27749233
chr1 28495878 28495889 USF1 JASPAR yes 118262348
chr1 28495878 28495892 JUN JASPAR yes 27749234
chr1 28495878 28495892 JUN JASPAR yes 118262349
chr1 28495880 28495891 BATF JASPAR yes 27749235
chr1 28495880 28495891 BATF JASPAR yes 118262350
chr1 28495881 28495892 FOSL2 JASPAR yes 27749236
chr1 28495881 28495892 JUNB JASPAR yes 27749237
chr1 28495881 28495892 FOSL2 JASPAR yes 118262351
chr1 28495881 28495892 JUNB JASPAR yes 118262352
chr1 28495882 28495893 FOS JASPAR yes 27749238
chr1 28495882 28495893 FOSL1 JASPAR yes 27749239
chr1 28495882 28495893 JUND JASPAR yes 27749240
chr1 28495882 28495893 FOS JASPAR yes 118262353
chr1 28495882 28495893 FOSL1 JASPAR yes 118262354
chr1 28495882 28495893 JUND JASPAR yes 118262355
chr1 28495883 28495892 JDP2 JASPAR yes 27749241
chr1 28495883 28495892 JDP2 JASPAR yes 118262356
chr1 28495883 28495894 JUNB JASPAR yes 27749242
chr1 28495883 28495894 JUNB JASPAR yes 118262357
chr1 28495883 28495897 JUN JASPAR yes 27749243
chr1 28495883 28495897 JUN JASPAR yes 118262358
chr1 28495884 28495895 BATF JASPAR yes 27749244
chr1 28495884 28495895 BATF JASPAR yes 118262359
chr1 28495890 28495900 HOXC10 JASPAR yes 27749245
chr1 28495890 28495900 HOXD11 JASPAR yes 27749246
chr1 28495890 28495900 HOXC10 JASPAR yes 118262360
chr1 28495890 28495900 HOXD11 JASPAR yes 118262361
chr1 28495890 28495901 HOXA10 JASPAR yes 27749247
chr1 28495890 28495901 HOXC11 JASPAR yes 27749248
chr1 28495890 28495901 HOXC12 JASPAR yes 27749249
chr1 28495890 28495901 HOXD12 JASPAR yes 27749250
chr1 28495890 28495901 HOXA10 JASPAR yes 118262362
chr1 28495890 28495901 HOXC11 JASPAR yes 118262363
chr1 28495890 28495901 HOXC12 JASPAR yes 118262364
chr1 28495890 28495901 HOXD12 JASPAR yes 118262365
chr1 28495891 28495900 CDX1 JASPAR yes 27749251
chr1 28495891 28495900 CDX1 JASPAR yes 118262366
chr1 28495891 28495902 CDX2 JASPAR yes 27749252
chr1 28495891 28495902 CDX2 JASPAR yes 118262367
chr1 28495930 28495941 E2F1 JASPAR yes 27749253
chr1 28495930 28495941 E2F1 JASPAR yes 118262368
chr1 28495935 28495947 TFAP2A JASPAR yes 27749254
chr1 28495935 28495947 TFAP2B JASPAR yes 27749255
chr1 28495935 28495947 TFAP2A JASPAR yes 118262369
chr1 28495935 28495947 TFAP2B JASPAR yes 118262370
chr1 28495948 28495952 YY1 TRANSFAC yes 27749256
chr1 28495948 28495952 YY1 TRANSFAC yes 118262371
chr1 28495979 28495993 SPI1 JASPAR yes 27749257
chr1 28495979 28495993 SPI1 JASPAR yes 118262372
chr1 28495984 28496000 SOX8 JASPAR yes 27749258
chr1 28495984 28496000 SOX8 JASPAR yes 118262373
chr1 28495996 28496000 YY1 TRANSFAC yes 27749259
chr1 28495996 28496000 YY1 TRANSFAC yes 118262374
chr1 28496005 28496015 MYF6 JASPAR yes 27749260
chr1 28496005 28496015 MYF6 JASPAR yes 118262375
chr1 28496029 28496042 SMAD2 JASPAR yes 27749261
chr1 28496029 28496042 SMAD2 JASPAR yes 118262376
SNP sites on vista992[chr1:28495580-28496044]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 28495767 rs149166551 T C no 190588
chr1 28495776 rs530900473 A C,G no 190589
chr1 28495794 rs190499384 T C no 190590
chr1 28495867 rs182249780 T C
FOXH1 MEF2A MEF2C NR3C1 NR3C2 SOX8 YY1
190591
chr1 28495884 rs532004652 A G
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND TFEB USF1
190592
chr1 28495991 rs143283714 G T
SOX8 SPI1
190593
Genes possibly regulated by vista992[chr1:28495580-28496044]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 28296855 28415207 - EYA3 ENSG00000158161.11 28415207 0.83 0.99 404 19627
chr1 28473677 28520447 - PTAFR ENSG00000169403.7 28520447 0.84 1.0 405 75597
chr1 28525967 28559536 - DNAJC8 ENSG00000126698.6 28559536 0.64 0.99 406 36508
chr1 28527013 28527152 - AL353354.1 ENSG00000215902.1 28527152 0.0 0.0 407 68892
chr1 28527070 28527419 + AL353354.2 ENSG00000269804.1 28527070 0.98 1.0 408 68974
chr1 28562620 28573417 + ATPIF1 ENSG00000130770.13 28562620 0.9 0.99 409 33424
chr1 28586038 28609002 + SESN2 ENSG00000130766.4 28586038 0.78 1.0 410 10006
Expression level of Genes
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miRNAs possibly regulated by vista992[chr1:28495580-28496044]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results