EnhancerDB
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  3. rs532004652[chr1:28495884]
Enhancers that have rs532004652[chr1:28495884]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28493545 28502817 enh184
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Thymus Epithelial (MCF-7)
chr1 28495580 28496044 vista992
VISTA
Transcript factors that have rs532004652[chr1:28495884]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28495877 28495888 USF1 JASPAR yes 27749231
chr1 28495877 28495888 USF1 JASPAR yes 118262346
chr1 28495878 28495888 TFEB JASPAR yes 27749232
chr1 28495878 28495888 TFEB JASPAR yes 118262347
chr1 28495878 28495889 USF1 JASPAR yes 27749233
chr1 28495878 28495889 USF1 JASPAR yes 118262348
chr1 28495878 28495892 JUN JASPAR yes 27749234
chr1 28495878 28495892 JUN JASPAR yes 118262349
chr1 28495880 28495891 BATF JASPAR yes 27749235
chr1 28495880 28495891 BATF JASPAR yes 118262350
chr1 28495881 28495892 FOSL2 JASPAR yes 27749236
chr1 28495881 28495892 JUNB JASPAR yes 27749237
chr1 28495881 28495892 FOSL2 JASPAR yes 118262351
chr1 28495881 28495892 JUNB JASPAR yes 118262352
chr1 28495882 28495893 FOS JASPAR yes 27749238
chr1 28495882 28495893 FOSL1 JASPAR yes 27749239
chr1 28495882 28495893 JUND JASPAR yes 27749240
chr1 28495882 28495893 FOS JASPAR yes 118262353
chr1 28495882 28495893 FOSL1 JASPAR yes 118262354
chr1 28495882 28495893 JUND JASPAR yes 118262355
chr1 28495883 28495892 JDP2 JASPAR yes 27749241
chr1 28495883 28495892 JDP2 JASPAR yes 118262356
chr1 28495883 28495894 JUNB JASPAR yes 27749242
chr1 28495883 28495894 JUNB JASPAR yes 118262357
chr1 28495883 28495897 JUN JASPAR yes 27749243
chr1 28495883 28495897 JUN JASPAR yes 118262358
chr1 28495884 28495895 BATF JASPAR yes 27749244
chr1 28495884 28495895 BATF JASPAR yes 118262359
Genes associated with rs532004652[chr1:28495884], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More