EnhancerDB
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  3. rs1040284[chr6:109673933]
Enhancers that have rs1040284[chr6:109673933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109652045 109675195 enh23490
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-SH) Lung Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Spleen Heart
Transcript factors that have rs1040284[chr6:109673933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109673920 109673934 ONECUT2 JASPAR yes 104247238
chr6 109673920 109673934 ONECUT3 JASPAR yes 104247239
chr6 109673921 109673933 IRF1 JASPAR yes 104247240
chr6 109673921 109673936 LEF1 JASPAR yes 104247241
chr6 109673923 109673936 POU3F3 JASPAR yes 104247242
Genes associated with rs1040284[chr6:109673933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 109761966 109765122 + SMPD2 ENSG00000135587.4 109761966 88033 Lung 1.10372e-12 6858