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- rs10415416[chr19:490081]
Enhancers that have rs10415416[chr19:490081]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
489577 |
495615 |
enh89912 |
|
|
Transcript factors that have rs10415416[chr19:490081]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
487843
|
490102
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343937
|
|
|
chr19
|
487859
|
490278
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343939
|
|
|
chr19
|
488015
|
490207
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108343942
|
|
|
chr19
|
488179
|
490223
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108343945
|
|
|
chr19
|
488239
|
490203
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108343948
|
|
|
chr19
|
488274
|
490229
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343952
|
|
|
chr19
|
488381
|
490086
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343955
|
|
|
chr19
|
488414
|
490137
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108343971
|
|
|
chr19
|
488417
|
490247
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343973
|
|
|
chr19
|
488418
|
490273
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343976
|
|
|
chr19
|
488420
|
490108
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343979
|
|
|
chr19
|
488422
|
490184
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343982
|
|
|
chr19
|
488427
|
490250
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108343984
|
|
|
chr19
|
488429
|
490151
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108343989
|
|
|
chr19
|
488433
|
490158
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108343996
|
|
|
chr19
|
488437
|
490133
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108344004
|
|
|
chr19
|
488437
|
490278
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108344005
|
|
|
chr19
|
488438
|
490086
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108344011
|
|
|
chr19
|
488449
|
490114
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108344031
|
|
|
chr19
|
488449
|
490174
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108344032
|
|
|
chr19
|
490068
|
490086
|
TP53
|
JASPAR
|
yes
|
|
111963105
|
|
Genes associated with rs10415416[chr19:490081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr19
|
489176
|
505347
|
+
|
MADCAM1
|
ENSG00000099866.10
|
489176
|
0
|
Breast
|
0.0495479
|
16703
|
|
|
chr19
|
489176
|
505347
|
+
|
MADCAM1
|
ENSG00000099866.10
|
489176
|
0
|
Lung
|
0.000735774
|
16703
|
|