EnhancerDB
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  3. rs10416900[chr19:2058694]
Enhancers that have rs10416900[chr19:2058694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs10416900[chr19:2058694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 21834143
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356650
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356651
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356652
chr19 2054538 2058987 ZNF274 GTRD no Blood (GM12878) 108356654
chr19 2055323 2058813 ZNF274 GTRD no Bone Marrow (K562) 21834164
chr19 2055323 2058813 ZNF274 GTRD no Bone Marrow (K562) 108356662
chr19 2055341 2058723 ZNF274 GTRD no Bone Marrow (K562) 21834166
chr19 2055341 2058723 ZNF274 GTRD no Bone Marrow (K562) 108356663
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 21834173
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356670
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356671
chr19 2055437 2063159 TCF7L2 GTRD no Colon (HCT116) 108356672
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 21834189
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 108356693
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 108356694
chr19 2055870 2062676 TCF7L2 GTRD no Colon (HCT116) 108356695
chr19 2057315 2062845 TCF7L2 GTRD no Colon (HCT116) 21834291
chr19 2057315 2062845 TCF7L2 GTRD no Colon (HCT116) 108356844
chr19 2057315 2062845 TCF7L2 GTRD no Colon (HCT116) 108356845
chr19 2057388 2060290 ZNF274 GTRD no Bone Marrow (K562) 21834293
chr19 2057388 2060290 ZNF274 GTRD no Bone Marrow (K562) 108356846
chr19 2057392 2063475 TCF7L2 GTRD no Colon (HCT116) 21834294
chr19 2057392 2063475 TCF7L2 GTRD no Colon (HCT116) 108356847
chr19 2057392 2063475 TCF7L2 GTRD no Colon (HCT116) 108356848
chr19 2057977 2058766 ZNF274 GTRD no Bone Marrow (K562) 21834303
chr19 2058117 2059225 P63 GTRD no Skin (Keratinocyte) 21834304
chr19 2058222 2059030 P63 GTRD no Skin (Keratinocyte) 21834305
chr19 2058242 2058970 P63 GTRD no Skin (Keratinocyte) 21834306
chr19 2058243 2062764 ZNF274 GTRD no Bone Marrow (K562) 21834307
chr19 2058243 2062764 ZNF274 GTRD no Bone Marrow (K562) 108356849
chr19 2058243 2062764 ZNF274 GTRD no Bone Marrow (K562) 108356850
chr19 2058344 2059189 P63 GTRD no Skin (Keratinocyte) 21834308
chr19 2058609 2060993 ZNF274 GTRD no Bone Marrow (K562) 21834310
chr19 2058609 2060993 ZNF274 GTRD no Bone Marrow (K562) 108356851
chr19 2058688 2058709 ZNF263 JASPAR yes 112045617
chr19 2058689 2058700 E2F6 JASPAR yes 112045618
chr19 2058689 2058710 ZNF263 JASPAR yes 112045619
chr19 2058691 2058712 ZNF263 JASPAR yes 112045620
Genes associated with rs10416900[chr19:2058694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 1107636 1174282 - SBNO2 ENSG00000064932.11 1174282 884412 Liver 0.279517 16735