EnhancerDB
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  3. rs10538253[chr6:43351784]
Enhancers that have rs10538253[chr6:43351784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43342345 43354195 enh9133
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Blood (T-cell) Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Thymus
chr6 43351423 43351855 vista52013
VISTA
Transcript factors that have rs10538253[chr6:43351784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43351315 43352149 NFIC UCSC Txn Factor no Conserved 108540299
chr6 43351345 43351818 ATF2 UCSC Txn Factor no Conserved 108540300
chr6 43351350 43351994 RUNX3 UCSC Txn Factor no Conserved 108540301
chr6 43351357 43352126 POLR2A UCSC Txn Factor no Conserved 108540302
chr6 43351358 43351809 MTA3 UCSC Txn Factor no Conserved 108540303
chr6 43351384 43352165 STAT5A UCSC Txn Factor no Conserved 108540305
chr6 43351386 43351786 FOXM1 UCSC Txn Factor no Conserved 108540306
chr6 43351502 43351799 PAX5 UCSC Txn Factor no Conserved 108540307
chr6 43351516 43351785 SPI1 UCSC Txn Factor no Conserved 108540309
chr6 43351772 43351784 HLF JASPAR yes 70367010
chr6 43351772 43351784 HLF JASPAR yes 101766703
chr6 43351784 43351794 BHLHE40 JASPAR yes 70367015
chr6 43351784 43351794 BHLHE41 JASPAR yes 70367016
chr6 43351784 43351794 MAX JASPAR yes 70367017
chr6 43351784 43351794 MLXIPL JASPAR yes 70367018
chr6 43351784 43351794 MNT JASPAR yes 70367019
chr6 43351784 43351794 SREBF2 JASPAR yes 70367020
chr6 43351784 43351794 TFE3 JASPAR yes 70367021
chr6 43351784 43351794 TFEB JASPAR yes 70367022
chr6 43351784 43351794 TFEC JASPAR yes 70367023
chr6 43351784 43351794 BHLHE40 JASPAR yes 101766708
chr6 43351784 43351794 BHLHE41 JASPAR yes 101766709
chr6 43351784 43351794 MAX JASPAR yes 101766710
chr6 43351784 43351794 MLXIPL JASPAR yes 101766711
chr6 43351784 43351794 MNT JASPAR yes 101766712
chr6 43351784 43351794 SREBF2 JASPAR yes 101766713
chr6 43351784 43351794 TFE3 JASPAR yes 101766714
chr6 43351784 43351794 TFEB JASPAR yes 101766715
chr6 43351784 43351794 TFEC JASPAR yes 101766716
chr6 43351784 43351795 USF1 JASPAR yes 70367024
chr6 43351784 43351795 USF2 JASPAR yes 70367025
chr6 43351784 43351795 USF1 JASPAR yes 101766717
chr6 43351784 43351795 USF2 JASPAR yes 101766718
Genes associated with rs10538253[chr6:43351784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More