EnhancerDB
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  3. rs10561003[chr15:40179800]
Enhancers that have rs10561003[chr15:40179800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40165269 40184115 enh31319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Astrocyte Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
chr15 40179429 40179904 vista19708
VISTA
Transcript factors that have rs10561003[chr15:40179800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40179331 40179911 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649065
chr15 40179331 40179911 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133325
chr15 40179433 40180103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649067
chr15 40179433 40180103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133328
chr15 40179433 40180103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133329
chr15 40179482 40179802 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649072
chr15 40179482 40179802 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133334
chr15 40179565 40179809 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649081
chr15 40179565 40179809 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133345
chr15 40179787 40179800 POU3F3 JASPAR yes 22917707
chr15 40179787 40179800 POU3F3 JASPAR yes 70511039
chr15 40179787 40179801 POU1F1 JASPAR yes 22917708
chr15 40179787 40179801 POU1F1 JASPAR yes 70511040
chr15 40179788 40179800 POU3F1 JASPAR yes 22917709
chr15 40179788 40179800 POU3F1 JASPAR yes 70511041
chr15 40179795 40179810 MEF2C JASPAR yes 22917710
chr15 40179795 40179810 MEF2C JASPAR yes 70511042
chr15 40179795 40179816 IRF1 JASPAR yes 22917711
chr15 40179795 40179816 IRF1 JASPAR yes 70511043
chr15 40179797 40179812 FOXP1 JASPAR yes 22917712
chr15 40179797 40179812 FOXP1 JASPAR yes 70511044
chr15 40179798 40179813 FOXP1 JASPAR yes 22917713
chr15 40179798 40179813 FOXP1 JASPAR yes 70511045
chr15 40179799 40179805 TBP TRANSFAC yes 22917714
chr15 40179799 40179805 TBP TRANSFAC yes 70511046
chr15 40179799 40179814 FOXP1 JASPAR yes 22917715
chr15 40179799 40179814 FOXP1 JASPAR yes 70511047
chr15 40179800 40179815 FOXP1 JASPAR yes 22917716
chr15 40179800 40179815 FOXP1 JASPAR yes 70511048
chr15 40179800 40179821 IRF1 JASPAR yes 22917717
chr15 40179800 40179821 IRF1 JASPAR yes 70511049
Genes associated with rs10561003[chr15:40179800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More