EnhancerDB
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  3. rs10653539[chr3:182446678]
Enhancers that have rs10653539[chr3:182446678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 182426445 182450499 enh54522
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Spleen Epithelial (MCF-7)
Transcript factors that have rs10653539[chr3:182446678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 182446670 182446681 TBX20 JASPAR yes 8131802
chr3 182446672 182446693 IRF1 JASPAR yes 8131804
chr3 182446674 182446689 PRDM1 JASPAR yes 8131805
chr3 182446674 182446689 STAT2 JASPAR yes 8131806
chr3 182446677 182446692 FOXP1 JASPAR yes 8131807
chr3 182446678 182446693 FOXP1 JASPAR yes 8131808
Genes associated with rs10653539[chr3:182446678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More