EnhancerDB
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  3. rs10690934[chr19:6862727]
Enhancers that have rs10690934[chr19:6862727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6859505 6870535 enh4991
Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Thymus Stomach
Transcript factors that have rs10690934[chr19:6862727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6862230 6863836 TCF7L2 GTRD no Colon (HCT116) 21846162
chr19 6862326 6863233 TCF7L2 GTRD no Colon (HCT116) 21846163
chr19 6862384 6863383 TCF7L2 GTRD no Colon (HCT116) 21846164
chr19 6862507 6863326 TEF1 GTRD no Bone (Osteoblast) 21846165
chr19 6862507 6864156 TCF7L2 GTRD no Colon (HCT116) 21846166
chr19 6862604 6863231 TCF7L2 GTRD no Colon (HCT116) 21846167
chr19 6862607 6864084 TCF7L2 GTRD no Colon (HCT116) 21846168
chr19 6862615 6863207 TCF7L2 GTRD no Colon (HCT116) 21846169
chr19 6862620 6863080 TCF7L2 GTRD no Colon (HCT116) 21846170
chr19 6862622 6863348 TCF7L2 GTRD no Colon (HCT116) 21846171
chr19 6862683 6863601 TCF7L2 GTRD no Colon (HCT116) 21846172
chr19 6862712 6863509 TCF7L2 GTRD no Colon (HCT116) 21846173
chr19 6862719 6862730 SMAD4 TRANSFAC yes 112293530
Genes associated with rs10690934[chr19:6862727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More