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- rs10747627[chr12:52584777]
Enhancers that have rs10747627[chr12:52584777]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
52584709 |
52584955 |
vista13456 |
|
|
Transcript factors that have rs10747627[chr12:52584777]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
52584591
|
52584901
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108033527
|
|
|
chr12
|
52584624
|
52585440
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108033528
|
|
|
chr12
|
52584624
|
52586591
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108033529
|
|
|
chr12
|
52584769
|
52584777
|
EHF
|
JASPAR
|
yes
|
|
82406133
|
|
|
chr12
|
52584772
|
52585062
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108033530
|
|
Genes associated with rs10747627[chr12:52584777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
51638342
|
51664674
|
-
|
SMAGP
|
ENSG00000170545.12
|
51664674
|
920103
|
Uterus
|
0.496441
|
12065
|
|