EnhancerDB
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  3. rs10789403[chr1:42085869]
Enhancers that have rs10789403[chr1:42085869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs10789403[chr1:42085869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42085850 42085870 TP53 JASPAR yes 28402133
chr1 42085852 42085872 TP63 JASPAR yes 28402134
chr1 42085853 42085871 TP53 JASPAR yes 28402135
chr1 42085853 42085871 TP63 JASPAR yes 28402136
chr1 42085853 42085871 TP73 JASPAR yes 28402137
chr1 42085854 42085869 TP53 JASPAR yes 28402138
chr1 42085855 42085870 TP53 JASPAR yes 28402139
chr1 42085862 42085874 PKNOX1 JASPAR yes 28402140
chr1 42085862 42085874 PKNOX2 JASPAR yes 28402141
chr1 42085862 42085874 TGIF1 JASPAR yes 28402142
chr1 42085862 42085874 TGIF2 JASPAR yes 28402143
chr1 42085863 42085872 SNAI2 JASPAR yes 28402144
chr1 42085863 42085873 ID4 JASPAR yes 28402145
chr1 42085868 42085883 SCRT1 JASPAR yes 28402146
Genes associated with rs10789403[chr1:42085869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More